Difference between revisions of "2-Lysophosphatidylcholines"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11841 RXN-11841] == * direction: ** LEFT-TO-RIGHT * common name: ** trna_pseudouridine_synthase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=L-IDITOL-2-DEHYDROGENASE-RXN L-IDITOL-2-DEHYDROGENASE-RXN] == * direction: ** REVERSIBLE * common n...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11841 RXN-11841] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=L-IDITOL-2-DEHYDROGENASE-RXN L-IDITOL-2-DEHYDROGENASE-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** trna_pseudouridine_synthase
+
** l-iditol_2-dehydrogenase
−
** trna_pseudouridinesynthase
+
** polyketide_synthase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/5.4.99.27 EC-5.4.99.27]
+
** [http://enzyme.expasy.org/EC/1.1.1.14 EC-1.1.1.14]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[tRNA-uridine13]][c] '''=>''' 1 [[tRNA-pseudouridine13]][c]
+
** 1 [[CPD-369]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-15616]][c] '''+''' 1 [[NADH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a uridine13 in tRNA[c] '''=>''' 1 a pseudouridine13 in tRNA[c]
+
** 1 L-iditol[c] '''+''' 1 NAD+[c] '''<=>''' 1 H+[c] '''+''' 1 keto-L-sorbose[c] '''+''' 1 NADH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2988]]
+
* [[Tiso_gene_6563]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***AUTOMATED-NAME-MATCH
+
***EC-NUMBER
−
* [[Tiso_gene_19622]]
+
* [[Tiso_gene_6562]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***AUTOMATED-NAME-MATCH
+
***EC-NUMBER
−
* [[Tiso_gene_11913]]
+
* [[Tiso_gene_5424]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***AUTOMATED-NAME-MATCH
+
***EC-NUMBER
−
* [[Tiso_gene_4020]]
+
* [[Tiso_gene_18533]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***AUTOMATED-NAME-MATCH
 
***AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_18959]]
+
* [[Tiso_gene_15088]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_5425]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***AUTOMATED-NAME-MATCH
+
***EC-NUMBER
−
* [[Tiso_gene_9833]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_4021]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=trna_pseudouridine_synthase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10160 10160]
−
{{#set: common name=trna_pseudouridinesynthase}}
+
* LIGAND-RXN:
−
{{#set: ec number=EC-5.4.99.27}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R07145 R07145]
−
{{#set: gene associated=Tiso_gene_2988|Tiso_gene_19622|Tiso_gene_11913|Tiso_gene_4020|Tiso_gene_18959|Tiso_gene_9833|Tiso_gene_4021}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q06004 Q06004]
 +
** [http://www.uniprot.org/uniprot/Q00796 Q00796]
 +
** [http://www.uniprot.org/uniprot/Q57517 Q57517]
 +
** [http://www.uniprot.org/uniprot/P77280 P77280]
 +
** [http://www.uniprot.org/uniprot/O35045 O35045]
 +
** [http://www.uniprot.org/uniprot/P27867 P27867]
 +
** [http://www.uniprot.org/uniprot/Q02912 Q02912]
 +
** [http://www.uniprot.org/uniprot/P36624 P36624]
 +
** [http://www.uniprot.org/uniprot/P35497 P35497]
 +
** [http://www.uniprot.org/uniprot/Q64442 Q64442]
 +
** [http://www.uniprot.org/uniprot/Q07786 Q07786]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=l-iditol_2-dehydrogenase}}
 +
{{#set: common name=polyketide_synthase}}
 +
{{#set: ec number=EC-1.1.1.14}}
 +
{{#set: gene associated=Tiso_gene_6563|Tiso_gene_6562|Tiso_gene_5424|Tiso_gene_18533|Tiso_gene_15088|Tiso_gene_5425}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 01:02, 19 March 2018

Reaction L-IDITOL-2-DEHYDROGENASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • l-iditol_2-dehydrogenase
    • polyketide_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-iditol[c] + 1 NAD+[c] <=> 1 H+[c] + 1 keto-L-sorbose[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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