Difference between revisions of "2.3.1.97-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_5065 == * left end position: ** 10490 * transcription direction: ** POSITIVE * right end position: ** 10820 * centisome position: ** 75.207...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRIBFAICARPISOM-RXN PRIBFAICARPISOM-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phospho...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_5065 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRIBFAICARPISOM-RXN PRIBFAICARPISOM-RXN] ==
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* left end position:
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* direction:
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** 10490
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** phosphoribosylformimino-5-aminoimidazole_carboxamide_ribonucleotide_isomerase
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* right end position:
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* ec number:
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** 10820
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** [http://enzyme.expasy.org/EC/5.3.1.16 EC-5.3.1.16]
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* centisome position:
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** 75.20792   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[MYRISTOYLACYLTRAN-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[PHOSPHORIBOSYL-FORMIMINO-AICAR-P]][c] '''=>''' 1 [[PHOSPHORIBULOSYL-FORMIMINO-AICAR-P]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide[c] '''=>''' 1 phosphoribulosylformimino-AICAR-phosphate[c]
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* [[KDO-NAGLIPASYN-PWY]]
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* [[KDO-LIPASYN-PWY]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_1565]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_11199]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways ==
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* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=10490}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15469 15469]
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{{#set: right end position=10820}}
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* LIGAND-RXN:
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{{#set: centisome position=75.20792    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R04640 R04640]
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{{#set: reaction associated=MYRISTOYLACYLTRAN-RXN}}
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* UNIPROT:
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{{#set: pathway associated=KDO-NAGLIPASYN-PWY|KDO-LIPASYN-PWY}}
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** [http://www.uniprot.org/uniprot/Q02131 Q02131]
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** [http://www.uniprot.org/uniprot/Q9JVH4 Q9JVH4]
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** [http://www.uniprot.org/uniprot/Q9PM74 Q9PM74]
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** [http://www.uniprot.org/uniprot/P44435 P44435]
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** [http://www.uniprot.org/uniprot/P10372 P10372]
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** [http://www.uniprot.org/uniprot/P10371 P10371]
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** [http://www.uniprot.org/uniprot/P16250 P16250]
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** [http://www.uniprot.org/uniprot/P05324 P05324]
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** [http://www.uniprot.org/uniprot/P26720 P26720]
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** [http://www.uniprot.org/uniprot/P50936 P50936]
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** [http://www.uniprot.org/uniprot/P74561 P74561]
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** [http://www.uniprot.org/uniprot/O82782 O82782]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=phosphoribosylformimino-5-aminoimidazole_carboxamide_ribonucleotide_isomerase}}
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{{#set: ec number=EC-5.3.1.16}}
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{{#set: gene associated=Tiso_gene_1565|Tiso_gene_11199}}
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{{#set: in pathway=HISTSYN-PWY}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 01:02, 19 March 2018

Reaction PRIBFAICARPISOM-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phosphoribosylformimino-5-aminoimidazole_carboxamide_ribonucleotide_isomerase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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