Difference between revisions of "PWY-7817"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.119-RXN 2.4.1.119-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** oligosaccharyl_tran...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.119-RXN 2.4.1.119-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** D-galactose degradation I (Leloir pathway)
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** oligosaccharyl_transferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.99.18 EC-2.4.99.18]
 
* Synonym(s):
 
* Synonym(s):
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** Leloir pathway
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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  '''5''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
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* [[ALDOSE1EPIM-RXN]]
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** 1 [[CPD-18076]][c] '''+''' 1 [[Protein-L-Asparagine]][c] '''=>''' 1 [[CPD-224]][c] '''+''' 1 [[CPD-18077]][c] '''+''' 1 [[PROTON]][c]
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* [[GALACTOKIN-RXN]]
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* With common name(s):
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* [[GALACTURIDYLYLTRANS-RXN]]
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** 1 α-D-Glc-(1→2)-α-D-Glc-(1→3)-α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 a [protein]-L-asparagine[c] '''=>''' 1 a dolichyl diphosphate[c] '''+''' 1 a [protein]-L-asparagine-[(glucosyl)3(mannosyl)9(N-acetylglucosaminyl)2][c] '''+''' 1 H+[c]
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* [[PHOSPHOGLUCMUT-RXN]]
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* [[UDPGLUCEPIM-RXN]]
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== Genes associated with this reaction  ==
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== Reaction(s) not found ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_26]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10448]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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** '''19''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ARACYC:
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* UNIPROT:
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** [http://metacyc.org/ARA/NEW-IMAGE?object=GALACTMETAB-PWY GALACTMETAB-PWY]
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** [http://www.uniprot.org/uniprot/P39656 P39656]
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.uniprot.org/uniprot/P48440 P48440]
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{{#set: taxonomic range=TAX-3193}}
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** [http://www.uniprot.org/uniprot/P41543 P41543]
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/P80896 P80896]
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{{#set: common name=D-galactose degradation I (Leloir pathway)}}
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** [http://www.uniprot.org/uniprot/P80897 P80897]
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{{#set: common name=Leloir pathway}}
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** [http://www.uniprot.org/uniprot/P48439 P48439]
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{{#set: reaction found=5}}
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** [http://www.uniprot.org/uniprot/P46964 P46964]
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{{#set: reaction not found=5}}
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** [http://www.uniprot.org/uniprot/Q92316 Q92316]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/Q10176 Q10176]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=oligosaccharyl_transferase}}
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{{#set: ec number=EC-2.4.99.18}}
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{{#set: gene associated=Tiso_gene_26|Tiso_gene_10448}}
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 19:25, 18 March 2018

Reaction 2.4.1.119-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • oligosaccharyl_transferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α-D-Glc-(1→2)-α-D-Glc-(1→3)-α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 1 a [protein]-L-asparagine[c] => 1 a dolichyl diphosphate[c] + 1 a [protein]-L-asparagine-[(glucosyl)3(mannosyl)9(N-acetylglucosaminyl)2][c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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