Difference between revisions of "2.4.1.142-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_17657 == * left end position: ** 127 * transcription direction: ** NEGATIVE * right end position: ** 3486 * centisome position: ** 3.581500...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.142-RXN 2.4.1.142-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** chitobiosyldiphosph...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_17657 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.142-RXN 2.4.1.142-RXN] ==
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* left end position:
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* direction:
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** 127
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** chitobiosyldiphosphodolichol_beta-
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* right end position:
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* ec number:
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** 3486
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** [http://enzyme.expasy.org/EC/2.4.1.142 EC-2.4.1.142]
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* centisome position:
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** 3.5815005   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[CYSTEINE--TRNA-LIGASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[NN-DIACETYLCHITOBIOSYLDIPHOSPHODOLICHO]][c] '''+''' 1 [[GDP-MANNOSE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ALPHA-D-MANNOSYLCHITOBIO]][c] '''+''' 1 [[GDP]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 N-acetyl-β-D-glucosaminyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphosphodolichol[c] '''+''' 1 GDP-α-D-mannose[c] '''=>''' 1 H+[c] '''+''' 1 β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 GDP[c]
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[TRNA-CHARGING-PWY]]
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* Gene: [[Tiso_gene_8387]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
 +
** '''19''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=127}}
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* LIGAND-RXN:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04502 R04502]
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{{#set: right end position=3486}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=3.5815005    }}
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{{#set: common name=chitobiosyldiphosphodolichol_beta-}}
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{{#set: reaction associated=CYSTEINE--TRNA-LIGASE-RXN}}
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{{#set: ec number=EC-2.4.1.142}}
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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{{#set: gene associated=Tiso_gene_8387}}
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:46, 21 March 2018

Reaction 2.4.1.142-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • chitobiosyldiphosphodolichol_beta-
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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