Difference between revisions of "2.4.1.223-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15046 RXN-15046] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.223-RXN 2.4.1.223-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15046 RXN-15046] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.223-RXN 2.4.1.223-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.101 EC-1.1.1.101]
+
** [http://enzyme.expasy.org/EC/2.4.1.223 EC-2.4.1.223]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-15924]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[L-1-LYSOPHOSPHATIDATE]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[GlcA-Gal-Gal-Xyl-Proteins]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''=>''' 1 [[GlcNAc-GlcA-Gal-Gal-Xyl-Protein]][c] '''+''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 1-oleoyl-2-lyso-glycerone phosphate[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 1-oleyl-2-lyso-phosphatidate[c] '''+''' 1 NADP+[c]
+
** 1 a [protein]-3-O-(β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] '''+''' 1 UDP-N-acetyl-α-D-glucosamine[c] '''=>''' 1 a [protein]-3-O-(α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] '''+''' 1 UDP[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_4321]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_10445]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_8143]]
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7411]], phosphatidate biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7411 PWY-7411]
+
* [[PWY-6558]], heparan sulfate biosynthesis (late stages): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6558 PWY-6558]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[orthology]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-esiliculosus]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[pantograph]]
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R07397 R07397]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.1.1.101}}
+
{{#set: ec number=EC-2.4.1.223}}
−
{{#set: in pathway=PWY-7411}}
+
{{#set: gene associated=Tiso_gene_4321|Tiso_gene_10445|Tiso_gene_8143}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: in pathway=PWY-6558}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:14, 21 March 2018

Reaction 2.4.1.223-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6558, heparan sulfate biosynthesis (late stages): PWY-6558
    • 3 reactions found over 13 reactions in the full pathway

Reconstruction information

External links




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