Difference between revisions of "2.5.1.19-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10058 RXN-10058] == * direction: ** LEFT-TO-RIGHT * common name: ** 2,5-diamino-6-(5-phosphorib...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.19-RXN 2.5.1.19-RXN] == * direction: ** REVERSIBLE * common name: ** pentafunctional_protein...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10058 RXN-10058] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.19-RXN 2.5.1.19-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** 2,5-diamino-6-(5-phosphoribitylamino)pyrimidin-4(3H)-one deaminase
+
** pentafunctional_protein
−
** drap_deaminase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.4 EC-3.5.4]
+
** [http://enzyme.expasy.org/EC/2.5.1.19 EC-2.5.1.19]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-10809]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[CPD-1086]][c]
+
** 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[SHIKIMATE-5P]][c] '''<=>''' 1 [[Pi]][c] '''+''' 1 [[3-ENOLPYRUVYL-SHIKIMATE-5P]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 H+[c] '''+''' 1 2,5-diamino-6-(5-phospho-D-ribitylamino)pyrimidin-4(3H)-one[c] '''=>''' 1 ammonium[c] '''+''' 1 5-amino-6-(5-phospho-D-ribitylamino)uracil[c]
+
** 1 phosphoenolpyruvate[c] '''+''' 1 shikimate 3-phosphate[c] '''<=>''' 1 phosphate[c] '''+''' 1 5-enolpyruvoyl-shikimate 3-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_17798]]
+
* Gene: [[Tiso_gene_5753]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_5752]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167]
+
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
−
** '''4''' reactions found over '''10''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
+
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21256 21256]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R09377 R09377]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03460 R03460]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* UNIPROT:
−
{{#set: common name=2,5-diamino-6-(5-phosphoribitylamino)pyrimidin-4(3H)-one deaminase}}
+
** [http://www.uniprot.org/uniprot/P22299 P22299]
−
{{#set: common name=drap_deaminase}}
+
** [http://www.uniprot.org/uniprot/P07547 P07547]
−
{{#set: ec number=EC-3.5.4}}
+
** [http://www.uniprot.org/uniprot/P08566 P08566]
−
{{#set: gene associated=Tiso_gene_17798}}
+
** [http://www.uniprot.org/uniprot/P22487 P22487]
−
{{#set: in pathway=PWY-6167|PWY-6168}}
+
** [http://www.uniprot.org/uniprot/P52312 P52312]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/Q9JTT3 Q9JTT3]
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
** [http://www.uniprot.org/uniprot/Q03421 Q03421]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/P19786 P19786]
 +
** [http://www.uniprot.org/uniprot/P17688 P17688]
 +
** [http://www.uniprot.org/uniprot/P24497 P24497]
 +
** [http://www.uniprot.org/uniprot/P23981 P23981]
 +
** [http://www.uniprot.org/uniprot/P23281 P23281]
 +
** [http://www.uniprot.org/uniprot/Q04570 Q04570]
 +
** [http://www.uniprot.org/uniprot/P43905 P43905]
 +
** [http://www.uniprot.org/uniprot/Q59975 Q59975]
 +
** [http://www.uniprot.org/uniprot/P12421 P12421]
 +
** [http://www.uniprot.org/uniprot/P07637 P07637]
 +
** [http://www.uniprot.org/uniprot/P19688 P19688]
 +
** [http://www.uniprot.org/uniprot/P0A6D3 P0A6D3]
 +
** [http://www.uniprot.org/uniprot/P11043 P11043]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=pentafunctional_protein}}
 +
{{#set: ec number=EC-2.5.1.19}}
 +
{{#set: gene associated=Tiso_gene_5753|Tiso_gene_5752}}
 +
{{#set: in pathway=PWY-6163}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-in-silico_annotation|manual-primary_network}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:56, 21 March 2018

Reaction 2.5.1.19-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • pentafunctional_protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6163, chorismate biosynthesis from 3-dehydroquinate: PWY-6163
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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