Difference between revisions of "2.5.1.39-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPERMINE-SYNTHASE-RXN SPERMINE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11135 RXN-11135] == * direction: ** REVERSIBLE * common name: ** dna_helicase * ec number: ** [...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPERMINE-SYNTHASE-RXN SPERMINE-SYNTHASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11135 RXN-11135] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** dna_helicase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.5.1.22 EC-2.5.1.22]
+
** [http://enzyme.expasy.org/EC/3.6.4.12 EC-3.6.4.12]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[SPERMIDINE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[SPERMINE]][c]
+
** 1 [[Double-helix-DNA]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[Unwound-DNA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 spermidine[c] '''+''' 1 S-adenosyl 3-(methylthio)propylamine[c] '''=>''' 1 H+[c] '''+''' 1 S-methyl-5'-thioadenosine[c] '''+''' 1 spermine[c]
+
** 1 a double-helix DNA[c] '''+''' 1 H2O[c] '''+''' 1 ATP[c] '''<=>''' 1 an unwound double-stranded DNA[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_17081]]
+
* [[Tiso_gene_7081]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_4087]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_4088]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_1799]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
** [[pantograph]]-[[creinhardtii]]
+
* [[Tiso_gene_1324]]
−
* [[Tiso_gene_17803]]
+
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_7734]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[ARGSPECAT-PWY]], spermine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ARGSPECAT-PWY ARGSPECAT-PWY]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[POLYAMINSYN3-PWY]], superpathway of polyamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=POLYAMINSYN3-PWY POLYAMINSYN3-PWY]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
−
*** [[esiliculosus]]
+
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19973 19973]
+
{{#set: common name=dna_helicase}}
−
* LIGAND-RXN:
+
{{#set: ec number=EC-3.6.4.12}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02869 R02869]
+
{{#set: gene associated=Tiso_gene_7081|Tiso_gene_4087|Tiso_gene_4088|Tiso_gene_1799|Tiso_gene_1324|Tiso_gene_7734}}
−
* UNIPROT:
+
{{#set: in pathway=}}
−
** [http://www.uniprot.org/uniprot/P52788 P52788]
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: ec number=EC-2.5.1.22}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: gene associated=Tiso_gene_17081|Tiso_gene_17803}}
+
−
{{#set: in pathway=ARGSPECAT-PWY|POLYAMINSYN3-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|esiliculosus}}
+

Revision as of 01:13, 19 March 2018

Reaction RXN-11135

  • direction:
    • REVERSIBLE
  • common name:
    • dna_helicase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a double-helix DNA[c] + 1 H2O[c] + 1 ATP[c] <=> 1 an unwound double-stranded DNA[c] + 1 H+[c] + 1 phosphate[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

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