Difference between revisions of "2.7.1.121-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5021 RXN0-5021] == * direction: ** REVERSIBLE * common name: ** dna_primase * ec number: ** [h...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11592 CPD-11592] == * smiles: ** CC(C)=CCNC3(C2(N=CN(C1(OC(COP(=O)([O-])O[a tRNA])C(OP([O-]...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5021 RXN0-5021] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11592 CPD-11592] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** CC(C)=CCNC3(C2(N=CN(C1(OC(COP(=O)([O-])O[a tRNA])C(OP([O-])(=O)O[a tRNA])C(O)1))C=2N=C(SC)N=3))
 
* common name:
 
* common name:
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** dna_primase
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** 2-methylthio-N6-dimethylallyladenosine37 in tRNA
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.7 EC-2.7.7]
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* Synonym(s):
 
* Synonym(s):
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** tRNA-(2-methylthio-N6-dimethylallyladenosine37)
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** a tRNA containing 2-methylthio-N6-dimethylallyladenosine37
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[Single-Stranded-DNAs]][c] '''<=>''' 1 [[Short-RNA-Fragments]][c]
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* [[RXN-14481]]
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* With common name(s):
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* [[RXN0-5063]]
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** 1 a single stranded DNA[c] '''<=>''' 1 a short RNA Segment[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_7205]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_4483]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_18238]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_7005]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=REVERSIBLE}}
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* CHEBI:
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{{#set: common name=dna_primase}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=74417 74417]
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{{#set: ec number=EC-2.7.7}}
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{{#set: smiles=CC(C)=CCNC3(C2(N=CN(C1(OC(COP(=O)([O-])O[a tRNA])C(OP([O-])(=O)O[a tRNA])C(O)1))C=2N=C(SC)N=3))}}
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{{#set: gene associated=Tiso_gene_7205|Tiso_gene_4483|Tiso_gene_18238|Tiso_gene_7005}}
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{{#set: common name=2-methylthio-N6-dimethylallyladenosine37 in tRNA}}
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{{#set: in pathway=}}
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{{#set: common name=tRNA-(2-methylthio-N6-dimethylallyladenosine37)|a tRNA containing 2-methylthio-N6-dimethylallyladenosine37}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: produced by=RXN-14481|RXN0-5063}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 16:50, 21 March 2018

Metabolite CPD-11592

  • smiles:
    • CC(C)=CCNC3(C2(N=CN(C1(OC(COP(=O)([O-])O[a tRNA])C(OP([O-])(=O)O[a tRNA])C(O)1))C=2N=C(SC)N=3))
  • common name:
    • 2-methylthio-N6-dimethylallyladenosine37 in tRNA
  • Synonym(s):
    • tRNA-(2-methylthio-N6-dimethylallyladenosine37)
    • a tRNA containing 2-methylthio-N6-dimethylallyladenosine37

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(C)=CCNC3(C2(N=CN(C1(OC(COP(=O)([O-])O[a tRNA])C(OP([O-])(=O)O[a tRNA])C(O)1))C=2N=C(SC)N=3))" cannot be used as a page name in this wiki.


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