Difference between revisions of "3-ISOPROPYLMALISOM-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_17668 == * left end position: ** 86 * transcription direction: ** NEGATIVE * right end position: ** 2364 * centisome position: ** 2.4280066...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-ISOPROPYLMALISOM-RXN 3-ISOPROPYLMALISOM-RXN] == * direction: ** REVERSIBLE * common name: ** 3-is...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_17668 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-ISOPROPYLMALISOM-RXN 3-ISOPROPYLMALISOM-RXN] ==
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* left end position:
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* direction:
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** 86
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** REVERSIBLE
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* transcription direction:
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* common name:
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** NEGATIVE
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** 3-isopropylmalate dehydratase
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* right end position:
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** ORF
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** 2364
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* centisome position:
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** 2.4280066   
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* Synonym(s):
 
* Synonym(s):
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** (2R,3S)-3-isopropylmalate hydro-lyase
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** β-isopropylmalate dehydratase
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** α-isopropylmalate isomerase
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** 3-isopropylmalate hydro-lyase
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3.4.22.34-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[WATER]][c] '''+''' 1 [[CPD-9451]][c] '''<=>''' 1 [[3-CARBOXY-3-HYDROXY-ISOCAPROATE]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 H2O[c] '''+''' 1 2-isopropylmaleate[c] '''<=>''' 1 (2S)-2-isopropylmalate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_12778]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=86}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16293 16293]
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{{#set: right end position=2364}}
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* LIGAND-RXN:
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{{#set: centisome position=2.4280066    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03968 R03968]
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{{#set: reaction associated=3.4.22.34-RXN}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q9PLW1 Q9PLW1]
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** [http://www.uniprot.org/uniprot/Q9JU82 Q9JU82]
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** [http://www.uniprot.org/uniprot/P80858 P80858]
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** [http://www.uniprot.org/uniprot/Q9UZ07 Q9UZ07]
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** [http://www.uniprot.org/uniprot/Q9JU81 Q9JU81]
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** [http://www.uniprot.org/uniprot/Q58673 Q58673]
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** [http://www.uniprot.org/uniprot/Q02144 Q02144]
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** [http://www.uniprot.org/uniprot/P44968 P44968]
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** [http://www.uniprot.org/uniprot/Q58667 Q58667]
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** [http://www.uniprot.org/uniprot/P44438 P44438]
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** [http://www.uniprot.org/uniprot/P0A6A6 P0A6A6]
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** [http://www.uniprot.org/uniprot/Q9PLW2 Q9PLW2]
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** [http://www.uniprot.org/uniprot/Q44022 Q44022]
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** [http://www.uniprot.org/uniprot/Q44023 Q44023]
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** [http://www.uniprot.org/uniprot/Q44427 Q44427]
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** [http://www.uniprot.org/uniprot/P17279 P17279]
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** [http://www.uniprot.org/uniprot/P04787 P04787]
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** [http://www.uniprot.org/uniprot/P15717 P15717]
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** [http://www.uniprot.org/uniprot/P18250 P18250]
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** [http://www.uniprot.org/uniprot/Q02142 Q02142]
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** [http://www.uniprot.org/uniprot/P30126 P30126]
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** [http://www.uniprot.org/uniprot/P50181 P50181]
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** [http://www.uniprot.org/uniprot/P07264 P07264]
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** [http://www.uniprot.org/uniprot/P74207 P74207]
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** [http://www.uniprot.org/uniprot/O86534 O86534]
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** [http://www.uniprot.org/uniprot/O86535 O86535]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=3-isopropylmalate dehydratase}}
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{{#set: common name=ORF}}
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{{#set: common name=(2R,3S)-3-isopropylmalate hydro-lyase|&beta;-isopropylmalate dehydratase|&alpha;-isopropylmalate isomerase|3-isopropylmalate hydro-lyase}}
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{{#set: gene associated=Tiso_gene_12778}}
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{{#set: in pathway=LEUSYN-PWY|PWY-6871}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:51, 21 March 2018

Reaction 3-ISOPROPYLMALISOM-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • 3-isopropylmalate dehydratase
    • ORF
  • Synonym(s):
    • (2R,3S)-3-isopropylmalate hydro-lyase
    • β-isopropylmalate dehydratase
    • α-isopropylmalate isomerase
    • 3-isopropylmalate hydro-lyase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • LEUSYN-PWY, L-leucine biosynthesis: LEUSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-6871, 3-methylbutanol biosynthesis (engineered): PWY-6871
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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