Difference between revisions of "3-OXOACYL-ACP-REDUCT-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_4087 == * left end position: ** 3920 * transcription direction: ** POSITIVE * right end position: ** 5288 * centisome position: ** 25.39847...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACYL-ACP-REDUCT-RXN 3-OXOACYL-ACP-REDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_4087 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACYL-ACP-REDUCT-RXN 3-OXOACYL-ACP-REDUCT-RXN] ==
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* left end position:
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* direction:
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** 3920
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** polyketide_synthase
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* right end position:
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** 3-oxoacyl-(acyl-carrier-protein)
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** 5288
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** 25.398472   
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-11135]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[B-KETOACYL-ACP]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[OH-ACYL-ACP]][c] '''+''' 1 [[NADP]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 a 3-oxoacyl-[acp][c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 a (3R)-3-hydroxyacyl-[acyl-carrier protein][c] '''+''' 1 NADP+[c]
 +
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_9885]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_13394]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_13083]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_135]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_10876]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_500]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_136]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
 +
== Pathways ==
 +
* [[FASYN-ELONG-PWY]], fatty acid elongation -- saturated: [http://metacyc.org/META/NEW-IMAGE?object=FASYN-ELONG-PWY FASYN-ELONG-PWY]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=3920}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02767 R02767]
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{{#set: right end position=5288}}
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* UNIPROT:
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{{#set: centisome position=25.398472    }}
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** [http://www.uniprot.org/uniprot/P49327 P49327]
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{{#set: reaction associated=RXN-11135}}
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** [http://www.uniprot.org/uniprot/O25286 O25286]
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** [http://www.uniprot.org/uniprot/P51831 P51831]
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** [http://www.uniprot.org/uniprot/Q9PI70 Q9PI70]
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** [http://www.uniprot.org/uniprot/P0AEK2 P0AEK2]
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** [http://www.uniprot.org/uniprot/Q9ZLS0 Q9ZLS0]
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** [http://www.uniprot.org/uniprot/P43713 P43713]
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** [http://www.uniprot.org/uniprot/P14802 P14802]
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** [http://www.uniprot.org/uniprot/O32229 O32229]
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** [http://www.uniprot.org/uniprot/Q9JW61 Q9JW61]
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** [http://www.uniprot.org/uniprot/O34782 O34782]
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** [http://www.uniprot.org/uniprot/O67610 O67610]
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** [http://www.uniprot.org/uniprot/P27583 P27583]
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** [http://www.uniprot.org/uniprot/P33207 P33207]
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** [http://www.uniprot.org/uniprot/P27582 P27582]
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** [http://www.uniprot.org/uniprot/P28643 P28643]
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** [http://www.uniprot.org/uniprot/P73574 P73574]
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** [http://www.uniprot.org/uniprot/O54438 O54438]
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** [http://www.uniprot.org/uniprot/P55336 P55336]
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** [http://www.uniprot.org/uniprot/Q9RA33 Q9RA33]
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** [http://www.uniprot.org/uniprot/Q44326 Q44326]
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** [http://www.uniprot.org/uniprot/P12276 P12276]
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** [http://www.uniprot.org/uniprot/P12785 P12785]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=polyketide_synthase}}
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{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: ec number=EC-1.1.1.100}}
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{{#set: gene associated=Tiso_gene_9885|Tiso_gene_13394|Tiso_gene_13083|Tiso_gene_135|Tiso_gene_10876|Tiso_gene_500|Tiso_gene_136}}
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{{#set: in pathway=FASYN-ELONG-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:15, 21 March 2018

Reaction 3-OXOACYL-ACP-REDUCT-RXN

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a 3-oxoacyl-[acp][c] + 1 NADPH[c] + 1 H+[c] => 1 a (3R)-3-hydroxyacyl-[acyl-carrier protein][c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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