Difference between revisions of "3-OXOACYL-ACP-SYNTH-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYL-COA-CARBOXYLTRANSFER-RXN ACETYL-COA-CARBOXYLTRANSFER-RXN] == * direction: ** LEFT-TO-RIGHT *...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7248 PWY-7248] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYL-COA-CARBOXYLTRANSFER-RXN ACETYL-COA-CARBOXYLTRANSFER-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** pectin degradation III
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** [http://enzyme.expasy.org/EC/6.4.1.2 EC-6.4.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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  '''1''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
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* [[GALACTUROISOM-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[ACETYL-COA]][c] '''+''' 1 [[HCO3]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[MALONYL-COA]][c]
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== Reaction(s) not found ==
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* With common name(s):
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* [http://metacyc.org/META/NEW-IMAGE?object=GALACTURAN-14-ALPHA-GALACTURONIDASE-RXN GALACTURAN-14-ALPHA-GALACTURONIDASE-RXN]
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** 1 ATP[c] '''+''' 1 acetyl-CoA[c] '''+''' 1 hydrogencarbonate[c] '''=>''' 1 phosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 malonyl-CoA[c]
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* [http://metacyc.org/META/NEW-IMAGE?object=PECTINESTERASE-RXN PECTINESTERASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14362 RXN-14362]
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== Genes associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14753 RXN-14753]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_7965]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2812]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5029]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_3800]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
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** '''8''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-5743]], 3-hydroxypropanoate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743]
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** '''4''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-5744]], glyoxylate assimilation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5744 PWY-5744]
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** '''2''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-6722]], candicidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6722 PWY-6722]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6679]], jadomycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6679 PWY-6679]
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** '''1''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-4381]], fatty acid biosynthesis initiation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4381 PWY-4381]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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* RHEA:
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{{#set: common name=pectin degradation III}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11308 11308]
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{{#set: reaction found=1}}
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* LIGAND-RXN:
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{{#set: reaction not found=5}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00742 R00742]
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{{#set: completion rate=20.0}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-6.4.1.2}}
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{{#set: gene associated=Tiso_gene_7965|Tiso_gene_2812|Tiso_gene_5029|Tiso_gene_3800}}
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{{#set: in pathway=PWY-7388|PWY-5789|PWY-5743|PWY-5744|PWY-6722|PWY-6679|PWY-4381}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation|manual-primary_network|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 19:04, 18 March 2018

Reaction ACETYL-COA-CARBOXYLTRANSFER-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 acetyl-CoA[c] + 1 hydrogencarbonate[c] => 1 phosphate[c] + 1 H+[c] + 1 ADP[c] + 1 malonyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): PWY-7388
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle: PWY-5789
    • 8 reactions found over 16 reactions in the full pathway
  • PWY-5743, 3-hydroxypropanoate cycle: PWY-5743
    • 4 reactions found over 11 reactions in the full pathway
  • PWY-5744, glyoxylate assimilation: PWY-5744
    • 2 reactions found over 11 reactions in the full pathway
  • PWY-6722, candicidin biosynthesis: PWY-6722
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6679, jadomycin biosynthesis: PWY-6679
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-4381, fatty acid biosynthesis initiation I: PWY-4381
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




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