Difference between revisions of "3-OXOADIPATE-ENOL-LACTONASE-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_6657 == * right end position: ** 3029 * transcription direction: ** POSITIVE * left end position: ** 42 * centisome position: ** 0.3515527...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOADIPATE-ENOL-LACTONASE-RXN 3-OXOADIPATE-ENOL-LACTONASE-RXN] == * direction: ** LEFT-TO-RIGHT *...")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_6657 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOADIPATE-ENOL-LACTONASE-RXN 3-OXOADIPATE-ENOL-LACTONASE-RXN] ==
−
* right end position:
+
* direction:
−
** 3029
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** alpha_beta_hydrolase_fold_protein
−
* left end position:
+
* ec number:
−
** 42
+
** [http://enzyme.expasy.org/EC/3.1.1.24 EC-3.1.1.24]
−
* centisome position:
+
−
** 0.3515527   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[GLUTAMIN-RXN]]
+
* With identifiers:
−
** Source: [[annotation-in-silico_annotation]]
+
** 1 [[3-OXOADIPATE-ENOL-LACTONE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[3-KETO-ADIPATE]][c] '''+''' 1 [[PROTON]][c]
−
*** Assignment: ec-number
+
* With common name(s):
−
** Source: [[annotation-experimental_annotation]]
+
** 1 (4,5-dihydro-5-oxofuran-2-yl)-acetate[c] '''+''' 1 H2O[c] '''=>''' 1 3-oxoadipate[c] '''+''' 1 H+[c]
−
*** Assignment: ec-number
+
 
−
** Source: [[orthology-esiliculosus]]
+
== Genes associated with this reaction  ==
−
* Reaction: [[GMP-SYN-GLUT-RXN]]
+
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_10066]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: ec-number
+
*** Assignment: EC-NUMBER
−
** Source: [[annotation-experimental_annotation]]
+
== Pathways  ==
−
*** Assignment: ec-number
+
* [[PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY]], protocatechuate degradation II (ortho-cleavage pathway): [http://metacyc.org/META/NEW-IMAGE?object=PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY]
−
** Source: [[orthology-athaliana]]
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
** Source: [[orthology-synechocystis]]
+
* [[CATECHOL-ORTHO-CLEAVAGE-PWY]], catechol degradation to β-ketoadipate: [http://metacyc.org/META/NEW-IMAGE?object=CATECHOL-ORTHO-CLEAVAGE-PWY CATECHOL-ORTHO-CLEAVAGE-PWY]
−
** Source: [[orthology-esiliculosus]]
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* Reaction: [[GMP-SYN-NH3-RXN]]
+
== Reconstruction information  ==
 +
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: ec-number
+
*** Tool: [[pathwaytools]]
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
== Pathways associated ==
+
−
* [[PWY-7221]]
+
−
* [[GLUTAMINDEG-PWY]]
+
−
* [[CITRULBIO-PWY]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: right end position=3029}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10184 10184]
−
{{#set: left end position=42}}
+
* LIGAND-RXN:
−
{{#set: centisome position=0.3515527    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02991 R02991]
−
{{#set: reaction associated=GLUTAMIN-RXN|GMP-SYN-GLUT-RXN|GMP-SYN-NH3-RXN}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: pathway associated=PWY-7221|GLUTAMINDEG-PWY|CITRULBIO-PWY}}
+
{{#set: common name=alpha_beta_hydrolase_fold_protein}}
 +
{{#set: ec number=EC-3.1.1.24}}
 +
{{#set: gene associated=Tiso_gene_10066}}
 +
{{#set: in pathway=PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY|CATECHOL-ORTHO-CLEAVAGE-PWY}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 21:16, 21 March 2018

Reaction 3-OXOADIPATE-ENOL-LACTONASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • alpha_beta_hydrolase_fold_protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=3-OXOADIPATE-ENOL-LACTONASE-RXN&oldid=47297"