|
|
| Line 1: |
Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANYL-KIN-RXN GUANYL-KIN-RXN] == | + | == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-Oxo-Delta-4-Steroids 3-Oxo-Delta-4-Steroids] == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| | * common name: | | * common name: |
| − | ** thymidine_phosphorylase | + | ** a 3-oxo-Δ4-steroid |
| − | ** ORF
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/2.7.4.8 EC-2.7.4.8]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
| − | * With identifiers:
| + | == Reaction(s) known to produce the compound == |
| − | ** 1 [[ATP]][c] '''+''' 1 [[GMP]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[ADP]][c]
| + | == Reaction(s) of unknown directionality == |
| − | * With common name(s):
| + | * [[RXN-13682]] |
| − | ** 1 ATP[c] '''+''' 1 GMP[c] '''=>''' 1 GDP[c] '''+''' 1 ADP[c]
| + | * [[1.3.99.5-RXN]] |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * Gene: [[Tiso_gene_1011]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_15049]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| − | ** Source: [[orthology-synechocystis]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_12554]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| − | ** Source: [[orthology-synechocystis]]
| + | |
| − | * Gene: [[Tiso_gene_4560]]
| + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| − | == Pathways == | + | |
| − | * [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221]
| + | |
| − | ** '''4''' reactions found over '''4''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * Category: [[orthology]] | + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| − | *** Tool: [[pantograph]] | + | |
| − | ** Source: [[orthology-synechocystis]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | * Category: [[manual]]
| + | |
| − | ** Source: [[manual-primary_network]]
| + | |
| − | * Category: [[annotation]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: common name=a 3-oxo-Δ4-steroid}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20780 20780]
| + | {{#set: reversible reaction associated=RXN-13682|1.3.99.5-RXN}} |
| − | * LIGAND-RXN:
| + | |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00332 R00332]
| + | |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PNB8 Q9PNB8]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9CEE3 Q9CEE3]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JT96 Q9JT96]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P44310 P44310]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P15454 P15454]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P60546 P60546]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P31006 P31006]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P46195 P46195]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q16774 Q16774]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P72648 P72648]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q6RHR9 Q6RHR9]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9M681 Q9M681]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}}
| + | |
| − | {{#set: common name=thymidine_phosphorylase}} | + | |
| − | {{#set: common name=ORF}}
| + | |
| − | {{#set: ec number=EC-2.7.4.8}}
| + | |
| − | {{#set: gene associated=Tiso_gene_1011|Tiso_gene_15049|Tiso_gene_12554|Tiso_gene_4560}} | + | |
| − | {{#set: in pathway=PWY-7221}}
| + | |
| − | {{#set: reconstruction category=orthology|manual|annotation}}
| + | |
| − | {{#set: reconstruction source=manual-primary_network|orthology-athaliana|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
| + | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| + | |
