Difference between revisions of "3-SULFINOALANINE-AMINOTRANSFERASE-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_4990 == * left end position: ** 742 * transcription direction: ** POSITIVE * right end position: ** 2693 * centisome position: ** 5.2796354...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEPHOSPHORYLATION-RXN AMP-DEPHOSPHORYLATION-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_4990 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEPHOSPHORYLATION-RXN AMP-DEPHOSPHORYLATION-RXN] ==
−
* left end position:
+
* direction:
−
** 742
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** 5_-nucleotidase
−
* right end position:
+
** 5_deoxy_cytosolic_type_c_protein
−
** 2693
+
** probable_cytosolic_imp-gmp_specific_5_-nucleotidase
−
* centisome position:
+
** ORF
−
** 5.2796354   
+
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[CATAL-RXN]]
+
* With identifiers:
−
** [[pantograph]]-[[synechocystis]]
+
** 1 [[AMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[ADENOSINE]][c]
−
* [[CYTOCHROME-C-PEROXIDASE-RXN]]
+
* With common name(s):
−
** in-silico_annotation
+
** 1 AMP[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 adenosine[c]
−
***ec-number
+
 
−
** experimental_annotation
+
== Genes associated with this reaction  ==
−
***ec-number
+
Genes have been associated with this reaction based on different elements listed below.
−
== Pathways associated ==
+
* Gene: [[Tiso_gene_6640]]
−
* [[PWY-5506]]
+
** Source: [[orthology-esiliculosus]]
−
* [[DETOX1-PWY]]
+
* Gene: [[Tiso_gene_6988]]
−
* [[DETOX1-PWY-1]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_14434]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5911]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_13929]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_14435]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_14246]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways ==
 +
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=742}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29375 29375]
−
{{#set: right end position=2693}}
+
* LIGAND-RXN:
−
{{#set: centisome position=5.2796354    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00183 R00183]
−
{{#set: reaction associated=CATAL-RXN|CYTOCHROME-C-PEROXIDASE-RXN}}
+
* UNIPROT:
−
{{#set: pathway associated=PWY-5506|DETOX1-PWY|DETOX1-PWY-1}}
+
** [http://www.uniprot.org/uniprot/P06196 P06196]
 +
** [http://www.uniprot.org/uniprot/P21588 P21588]
 +
** [http://www.uniprot.org/uniprot/O34313 O34313]
 +
** [http://www.uniprot.org/uniprot/Q9KM44 Q9KM44]
 +
** [http://www.uniprot.org/uniprot/O29385 O29385]
 +
** [http://www.uniprot.org/uniprot/P44569 P44569]
 +
** [http://www.uniprot.org/uniprot/O83142 O83142]
 +
** [http://www.uniprot.org/uniprot/P49902 P49902]
 +
** [http://www.uniprot.org/uniprot/P22848 P22848]
 +
** [http://www.uniprot.org/uniprot/Q05927 Q05927]
 +
** [http://www.uniprot.org/uniprot/P21589 P21589]
 +
** [http://www.uniprot.org/uniprot/P29240 P29240]
 +
** [http://www.uniprot.org/uniprot/P07024 P07024]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=5_-nucleotidase}}
 +
{{#set: common name=5_deoxy_cytosolic_type_c_protein}}
 +
{{#set: common name=probable_cytosolic_imp-gmp_specific_5_-nucleotidase}}
 +
{{#set: common name=ORF}}
 +
{{#set: ec number=EC-3.1.3.5}}
 +
{{#set: gene associated=Tiso_gene_6640|Tiso_gene_6988|Tiso_gene_14434|Tiso_gene_5911|Tiso_gene_13929|Tiso_gene_14435|Tiso_gene_14246}}
 +
{{#set: in pathway=SALVADEHYPOX-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:59, 21 March 2018

Reaction AMP-DEPHOSPHORYLATION-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5_-nucleotidase
    • 5_deoxy_cytosolic_type_c_protein
    • probable_cytosolic_imp-gmp_specific_5_-nucleotidase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 AMP[c] + 1 H2O[c] => 1 phosphate[c] + 1 adenosine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=3-SULFINOALANINE-AMINOTRANSFERASE-RXN&oldid=31694"