Difference between revisions of "3-oxo-hexanoyl-ACPs"

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(Created page with "Category:Gene == Gene Tiso_gene_3314 == * left end position: ** 11991 * transcription direction: ** POSITIVE * right end position: ** 14388 * centisome position: ** 70.411...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16401 RXN-16401] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** acyl...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_3314 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16401 RXN-16401] ==
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* left end position:
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* direction:
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** 11991
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** polyketide_synthase
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* right end position:
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** acyl-_synthetase
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** 14388
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** ORF
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* centisome position:
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** long_chain_acyl-_synthetase
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** 70.41104   
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
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* With identifiers:
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** [[pantograph]]-[[esiliculosus]]
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** 1 [[CPD-17640]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[CPD-17641]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
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* [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
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* With common name(s):
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** [[pantograph]]-[[esiliculosus]]
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** 1 18-hydroxystearate[c] '''+''' 1 coenzyme A[c] '''+''' 1 ATP[c] '''=>''' 1 18-hydroxystearoyl-CoA[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
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* [[RXN-15684]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_136]]
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* [[THIOL-OXIDASE-RXN]]
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** IN-SILICO_ANNOTATION
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** in-silico_annotation
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***EC-NUMBER
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***ec-number
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* [[Tiso_gene_9394]]
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** [[pantograph]]-[[esiliculosus]]
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** IN-SILICO_ANNOTATION
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== Pathways associated ==
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***EC-NUMBER
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* [[PWY-7539]]
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** EXPERIMENTAL_ANNOTATION
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* [[PWY-7533]]
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***EC-NUMBER
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* [[PWY-6797]]
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* [[Tiso_gene_7855]]
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* [[PWY-6147]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_348]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
 +
* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4191]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
== Pathways ==
 +
* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=11991}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=polyketide_synthase}}
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{{#set: right end position=14388}}
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{{#set: common name=acyl-_synthetase}}
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{{#set: centisome position=70.41104    }}
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{{#set: common name=ORF}}
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{{#set: reaction associated=DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN|H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN|RXN-15684|THIOL-OXIDASE-RXN}}
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{{#set: common name=long_chain_acyl-_synthetase}}
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{{#set: pathway associated=PWY-7539|PWY-7533|PWY-6797|PWY-6147}}
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{{#set: ec number=EC-6.2.1.3}}
 +
{{#set: gene associated=Tiso_gene_136|Tiso_gene_9394|Tiso_gene_7855|Tiso_gene_135|Tiso_gene_500|Tiso_gene_348|Tiso_gene_10876|Tiso_gene_13394|Tiso_gene_4191}}
 +
{{#set: in pathway=PWY-6733}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 18:14, 10 January 2018

Reaction RXN-16401

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polyketide_synthase
    • acyl-_synthetase
    • ORF
    • long_chain_acyl-_synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 18-hydroxystearate[c] + 1 coenzyme A[c] + 1 ATP[c] => 1 18-hydroxystearoyl-CoA[c] + 1 AMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6733, sporopollenin precursors biosynthesis: PWY-6733
    • 8 reactions found over 18 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=3-oxo-hexanoyl-ACPs&oldid=16845"