Difference between revisions of "3-phosphooligoribonucleotides"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN] == * direction: ** REV...")
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** REVERSIBLE
 
* common name:
 
* common name:
** jasmonic acid biosynthesis
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** queuine_trna-ribosyltransferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.2.29 EC-2.4.2.29]
 
* Synonym(s):
 
* Synonym(s):
** jasmonate biosynthesis
 
  
== Reaction(s) found ==
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== Reaction Formula ==
'''15''' reactions found over '''19''' reactions in the full pathway
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* With identifiers:
* [[RXN-10695]]
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** 1 [[Guanine34-in-tRNAs]][c] '''+''' 1 [[QUEUINE]][c] '''<=>''' 1 [[GUANINE]][c] '''+''' 1 [[tRNAs-with-queuine]][c]
* [[RXN-10696]]
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* With common name(s):
* [[RXN-10697]]
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** 1 a guanine34 in tRNA[c] '''+''' 1 queuine[c] '''<=>''' 1 guanine[c] '''+''' 1 a queuosine34 in tRNA[c]
* [[RXN-10698]]
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* [[RXN-10699]]
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== Genes associated with this reaction  ==
* [[RXN-10700]]
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Genes have been associated with this reaction based on different elements listed below.
* [[RXN-10701]]
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* [[Tiso_gene_12326]]
* [[RXN-10702]]
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** [[pantograph]]-[[esiliculosus]]
* [[RXN-10703]]
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* [[Tiso_gene_17]]
* [[RXN-10704]]
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** IN-SILICO_ANNOTATION
* [[RXN-10705]]
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***EC-NUMBER
* [[RXN-10706]]
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** [[pantograph]]-[[esiliculosus]]
* [[RXN-10707]]
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* [[Tiso_gene_18857]]
* [[RXN-10708]]
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** IN-SILICO_ANNOTATION
* [[RXN-1321]]
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***EC-NUMBER
== Reaction(s) not found ==
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** [[pantograph]]-[[esiliculosus]]
* [http://metacyc.org/META/NEW-IMAGE?object=12-OXOPHYTODIENOATE-REDUCTASE-RXN 12-OXOPHYTODIENOATE-REDUCTASE-RXN]
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== Pathways  ==
* [http://metacyc.org/META/NEW-IMAGE?object=ALLENE-OXIDE-CYCLASE-RXN ALLENE-OXIDE-CYCLASE-RXN]
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== Reconstruction information  ==
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-745 RXN-745]
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* Category: [[orthology]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-19 RXN1F-19]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* ARACYC:
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* LIGAND-RXN:
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-735 PWY-735]
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** [http://www.genome.jp/dbget-bin/www_bget?R03789 R03789]
{{#set: taxonomic range=TAX-33090}}
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* UNIPROT:
{{#set: common name=jasmonic acid biosynthesis}}
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** [http://www.uniprot.org/uniprot/P44594 P44594]
{{#set: common name=jasmonate biosynthesis}}
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** [http://www.uniprot.org/uniprot/Q9JVA4 Q9JVA4]
{{#set: reaction found=15}}
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** [http://www.uniprot.org/uniprot/O32053 O32053]
{{#set: reaction not found=19}}
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** [http://www.uniprot.org/uniprot/P0A847 P0A847]
{{#set: completion rate=79.0}}
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** [http://www.uniprot.org/uniprot/Q57878 Q57878]
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** [http://www.uniprot.org/uniprot/O28787 O28787]
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** [http://www.uniprot.org/uniprot/P54578 P54578]
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** [http://www.uniprot.org/uniprot/Q9PNT0 Q9PNT0]
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** [http://www.uniprot.org/uniprot/O67331 O67331]
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** [http://www.uniprot.org/uniprot/Q9CJ54 Q9CJ54]
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** [http://www.uniprot.org/uniprot/P40826 P40826]
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** [http://www.uniprot.org/uniprot/Q55983 Q55983]
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** [http://www.uniprot.org/uniprot/Q17361 Q17361]
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{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=queuine_trna-ribosyltransferase}}
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{{#set: ec number=EC-2.4.2.29}}
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{{#set: gene associated=Tiso_gene_12326|Tiso_gene_17|Tiso_gene_18857}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 19:22, 18 March 2018

Reaction QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • queuine_trna-ribosyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links