Difference between revisions of "3.1.26.5-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_19690 == * Synonym(s): == Reactions associated == * Reaction: NAPHTHOATE-SYN-RXN ** Source: orthology-synechocystis * Reaction: ...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.5-RXN 3.1.26.5-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** oxidoreductase ** ORF...")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_19690 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.5-RXN 3.1.26.5-RXN] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 +
* common name:
 +
** oxidoreductase
 +
** ORF
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.26.5 EC-3.1.26.5]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[NAPHTHOATE-SYN-RXN]]
+
* With identifiers:
−
** Source: [[orthology-synechocystis]]
+
** 1 [[WATER]][c] '''+''' 1 [[CPD0-2352]][c] '''=>''' 1 [[tRNA-fragment]][c] '''+''' 1 [[CPD0-2353]][c]
−
* Reaction: [[RXN1K-87]]
+
* With common name(s):
−
** Source: [[orthology-athaliana]]
+
** 1 H2O[c] '''+''' 1 a tRNA precursor with a 5' extension and a short 3' extension[c] '''=>''' 1 a tRNA fragment[c] '''+''' 1 a tRNA precursor with a short 3' extension[c]
−
== Pathways associated ==
+
 
−
* [[PWY-5837]]
+
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_14345]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10972]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_3898]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10971]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_14344]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways ==
 +
* [[PWY0-1479]], tRNA processing: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1479 PWY0-1479]
 +
** '''4''' reactions found over '''10''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: reaction associated=NAPHTHOATE-SYN-RXN|RXN1K-87}}
+
* UNIPROT:
−
{{#set: pathway associated=PWY-5837}}
+
** [http://www.uniprot.org/uniprot/Q02773 Q02773]
 +
** [http://www.uniprot.org/uniprot/P41812 P41812]
 +
** [http://www.uniprot.org/uniprot/P0A5X8 P0A5X8]
 +
** [http://www.uniprot.org/uniprot/P48206 P48206]
 +
** [http://www.uniprot.org/uniprot/Q9JW46 Q9JW46]
 +
** [http://www.uniprot.org/uniprot/Q9PNX5 Q9PNX5]
 +
** [http://www.uniprot.org/uniprot/Q9CJ73 Q9CJ73]
 +
** [http://www.uniprot.org/uniprot/P29433 P29433]
 +
** [http://www.uniprot.org/uniprot/P25817 P25817]
 +
** [http://www.uniprot.org/uniprot/P22835 P22835]
 +
** [http://www.uniprot.org/uniprot/P25814 P25814]
 +
** [http://www.uniprot.org/uniprot/P0A7Y8 P0A7Y8]
 +
** [http://www.uniprot.org/uniprot/Q55005 Q55005]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=oxidoreductase}}
 +
{{#set: common name=ORF}}
 +
{{#set: ec number=EC-3.1.26.5}}
 +
{{#set: gene associated=Tiso_gene_14345|Tiso_gene_10972|Tiso_gene_3898|Tiso_gene_10971|Tiso_gene_14344}}
 +
{{#set: in pathway=PWY0-1479}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:48, 21 March 2018

Reaction 3.1.26.5-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • oxidoreductase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 a tRNA precursor with a 5' extension and a short 3' extension[c] => 1 a tRNA fragment[c] + 1 a tRNA precursor with a short 3' extension[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1479, tRNA processing: PWY0-1479
    • 4 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=3.1.26.5-RXN&oldid=43873"