Difference between revisions of "3.1.4.11-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9648 RXN-9648] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** 3-oxoa...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.11-RXN 3.1.4.11-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phospholipase_c_beta_...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9648 RXN-9648] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.11-RXN 3.1.4.11-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** polyketide_synthase
+
** phospholipase_c_beta_4
−
** 3-oxoacyl-synthase
+
** 1-phosphatidylinositol-_-bisphosphate_phosphodiesterase_gamma-2
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/3.1.4.11 EC-3.1.4.11]
−
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
+
−
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Butanoyl-ACPs]][c] '''=>''' 1 [[3-oxo-hexanoyl-ACPs]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INOSITOL-1-4-5-TRISPHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[DIACYLGLYCEROL]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 malonyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 a butyryl-[acp][c] '''=>''' 1 a 3-oxo-hexanoyl-[acp][c] '''+''' 1 coenzyme A[c] '''+''' 1 CO2[c]
+
** 1 a 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate[c] '''+''' 1 H2O[c] '''=>''' 1 D-myo-inositol (1,4,5)-trisphosphate[c] '''+''' 1 H+[c] '''+''' 1 a 1,2-diacyl-sn-glycerol[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_13394]]
+
* Gene: [[Tiso_gene_7561]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_500]]
+
* Gene: [[Tiso_gene_12019]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_12020]]
−
* [[Tiso_gene_19302]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_10876]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_15991]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_14485]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_5939]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_135]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_136]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
+
* [[PWY-6367]], D-myo-inositol-5-phosphate metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6367 PWY-6367]
−
** '''31''' reactions found over '''31''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6351 PWY-6351]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7039]], phosphatidate metabolism, as a signaling molecule: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7039 PWY-7039]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[LIPASYN-PWY]], phospholipases: [http://metacyc.org/META/NEW-IMAGE?object=LIPASYN-PWY LIPASYN-PWY]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
Line 59: Line 46:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03435 R03435]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P10687 P10687]
 +
** [http://www.uniprot.org/uniprot/P10894 P10894]
 +
** [http://www.uniprot.org/uniprot/P10686 P10686]
 +
** [http://www.uniprot.org/uniprot/P24135 P24135]
 +
** [http://www.uniprot.org/uniprot/P19174 P19174]
 +
** [http://www.uniprot.org/uniprot/Q00722 Q00722]
 +
** [http://www.uniprot.org/uniprot/Q02158 Q02158]
 +
** [http://www.uniprot.org/uniprot/P32383 P32383]
 +
** [http://www.uniprot.org/uniprot/Q9TS13 Q9TS13]
 +
** [http://www.uniprot.org/uniprot/Q24284 Q24284]
 +
** [http://www.uniprot.org/uniprot/P51178 P51178]
 +
** [http://www.uniprot.org/uniprot/P10688 P10688]
 +
** [http://www.uniprot.org/uniprot/P10895 P10895]
 +
** [http://www.uniprot.org/uniprot/Q60450 Q60450]
 +
** [http://www.uniprot.org/uniprot/P08487 P08487]
 +
** [http://www.uniprot.org/uniprot/Q9STZ3 Q9STZ3]
 +
** [http://www.uniprot.org/uniprot/P40977 P40977]
 +
** [http://www.uniprot.org/uniprot/Q21754 Q21754]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=polyketide_synthase}}
+
{{#set: common name=phospholipase_c_beta_4}}
−
{{#set: common name=3-oxoacyl-synthase}}
+
{{#set: common name=1-phosphatidylinositol-_-bisphosphate_phosphodiesterase_gamma-2}}
−
{{#set: ec number=EC-2.3.1.86}}
+
{{#set: ec number=EC-3.1.4.11}}
−
{{#set: ec number=EC-2.3.1.85}}
+
{{#set: gene associated=Tiso_gene_7561|Tiso_gene_12019|Tiso_gene_12020}}
−
{{#set: ec number=EC-2.3.1.41}}
+
{{#set: in pathway=PWY-6367|PWY-6351|PWY-7039|LIPASYN-PWY}}
−
{{#set: gene associated=Tiso_gene_13394|Tiso_gene_500|Tiso_gene_19302|Tiso_gene_10876|Tiso_gene_15991|Tiso_gene_14485|Tiso_gene_5939|Tiso_gene_135|Tiso_gene_136}}
+
−
{{#set: in pathway=PWY-5994}}
+
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:01, 21 March 2018

Reaction 3.1.4.11-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phospholipase_c_beta_4
    • 1-phosphatidylinositol-_-bisphosphate_phosphodiesterase_gamma-2
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6367, D-myo-inositol-5-phosphate metabolism: PWY-6367
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6351, D-myo-inositol (1,4,5)-trisphosphate biosynthesis: PWY-6351
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7039, phosphatidate metabolism, as a signaling molecule: PWY-7039
    • 2 reactions found over 5 reactions in the full pathway
  • LIPASYN-PWY, phospholipases: LIPASYN-PWY
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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