Difference between revisions of "3.2.1.21-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-SYNTHASE-NADH-RXN GLUTAMATE-SYNTHASE-NADH-RXN] == * direction: ** LEFT-TO-RIGHT * ec numb...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.21-RXN 3.2.1.21-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** beta-glucosidase-like...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-SYNTHASE-NADH-RXN GLUTAMATE-SYNTHASE-NADH-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.21-RXN 3.2.1.21-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** beta-glucosidase-like_chloroplastic
 +
** ORF
 +
** low_quality_protein:_beta-glucosidase-like_chloroplastic-like
 +
** beta_glucosidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.4.1.14 EC-1.4.1.14]
+
** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[NAD]][c] '''+''' 2 [[GLT]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[Beta-D-glucosides]][c] '''=>''' 1 [[Glucopyranose]][c] '''+''' 1 [[Non-Glucosylated-Glucose-Acceptors]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 2-oxoglutarate[c] '''+''' 1 H+[c] '''+''' 1 L-glutamine[c] '''+''' 1 NADH[c] '''=>''' 1 NAD+[c] '''+''' 2 L-glutamate[c]
+
** 1 H2O[c] '''+''' 1 a β-D glucoside[c] '''=>''' 1 D-glucopyranose[c] '''+''' 1 a non glucosylated D-glucose acceptor[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_1154]]
+
* Gene: [[Tiso_gene_2344]]
−
** [[pantograph]]-[[synechocystis]]
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_11511]]
+
* Gene: [[Tiso_gene_13305]]
−
** [[pantograph]]-[[synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_2581]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-experimental_annotation]]
−
** [[pantograph]]-[[synechocystis]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_15067]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[creinhardtii]]
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10001]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_13306]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_2843]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_8669]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6188]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_15066]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6497]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_5836]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6007]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6187]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_3467]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[GLUGLNSYN-PWY]], L-glutamate biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=GLUGLNSYN-PWY GLUGLNSYN-PWY]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-6963]], ammonia assimilation cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6963 PWY-6963]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
−
*** [[synechocystis]]
+
* Category: [[annotation]]
−
*** [[esiliculosus]]
+
** Source: [[annotation-experimental_annotation]]
−
*** [[athaliana]]
+
*** Tool: [[pathwaytools]]
−
* [[manual]]:
+
** Source: [[annotation-in-silico_annotation]]
−
** [[primary_network]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13753 13753]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00093 R00093]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9RXX2 Q9RXX2]
+
** [http://www.uniprot.org/uniprot/P29091 P29091]
−
** [http://www.uniprot.org/uniprot/Q03460 Q03460]
+
** [http://www.uniprot.org/uniprot/P29090 P29090]
−
** [http://www.uniprot.org/uniprot/Q22275 Q22275]
+
** [http://www.uniprot.org/uniprot/P27034 P27034]
−
** [http://www.uniprot.org/uniprot/O61143 O61143]
+
** [http://www.uniprot.org/uniprot/P16084 P16084]
−
** [http://www.uniprot.org/uniprot/Q9C102 Q9C102]
+
** [http://www.uniprot.org/uniprot/Q03506 Q03506]
−
** [http://www.uniprot.org/uniprot/Q9P540 Q9P540]
+
** [http://www.uniprot.org/uniprot/Q23892 Q23892]
 +
** [http://www.uniprot.org/uniprot/Q9CFI7 Q9CFI7]
 +
** [http://www.uniprot.org/uniprot/P22507 P22507]
 +
** [http://www.uniprot.org/uniprot/P33363 P33363]
 +
** [http://www.uniprot.org/uniprot/Q9WXN2 Q9WXN2]
 +
** [http://www.uniprot.org/uniprot/Q9CFL0 Q9CFL0]
 +
** [http://www.uniprot.org/uniprot/Q9CJ31 Q9CJ31]
 +
** [http://www.uniprot.org/uniprot/P12614 P12614]
 +
** [http://www.uniprot.org/uniprot/P06835 P06835]
 +
** [http://www.uniprot.org/uniprot/P26205 P26205]
 +
** [http://www.uniprot.org/uniprot/P26204 P26204]
 +
** [http://www.uniprot.org/uniprot/P07337 P07337]
 +
** [http://www.uniprot.org/uniprot/Q8X8G6 Q8X8G6]
 +
** [http://www.uniprot.org/uniprot/Q12653 Q12653]
 +
** [http://www.uniprot.org/uniprot/P48825 P48825]
 +
** [http://www.uniprot.org/uniprot/P94248 P94248]
 +
** [http://www.uniprot.org/uniprot/O24749 O24749]
 +
** [http://www.uniprot.org/uniprot/Q9SPK3 Q9SPK3]
 +
** [http://www.uniprot.org/uniprot/P22073 P22073]
 +
** [http://www.uniprot.org/uniprot/P22505 P22505]
 +
** [http://www.uniprot.org/uniprot/P96316 P96316]
 +
** [http://www.uniprot.org/uniprot/P10482 P10482]
 +
** [http://www.uniprot.org/uniprot/P14002 P14002]
 +
** [http://www.uniprot.org/uniprot/P15885 P15885]
 +
** [http://www.uniprot.org/uniprot/P26208 P26208]
 +
** [http://www.uniprot.org/uniprot/Q41172 Q41172]
 +
** [http://www.uniprot.org/uniprot/Q7M0Q7 Q7M0Q7]
 +
** [http://www.uniprot.org/uniprot/Q08638 Q08638]
 +
** [http://www.uniprot.org/uniprot/Q9S9H4 Q9S9H4]
 +
** [http://www.uniprot.org/uniprot/Q59976 Q59976]
 +
** [http://www.uniprot.org/uniprot/Q59437 Q59437]
 +
** [http://www.uniprot.org/uniprot/Q42618 Q42618]
 +
** [http://www.uniprot.org/uniprot/Q42975 Q42975]
 +
** [http://www.uniprot.org/uniprot/Q40984 Q40984]
 +
** [http://www.uniprot.org/uniprot/Q43073 Q43073]
 +
** [http://www.uniprot.org/uniprot/O82074 O82074]
 +
** [http://www.uniprot.org/uniprot/O24524 O24524]
 +
** [http://www.uniprot.org/uniprot/Q8CJM3 Q8CJM3]
 +
** [http://www.uniprot.org/uniprot/Q9X9R4 Q9X9R4]
 +
** [http://www.uniprot.org/uniprot/O68843 O68843]
 +
** [http://www.uniprot.org/uniprot/O82772 O82772]
 +
** [http://www.uniprot.org/uniprot/O49117 O49117]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.4.1.14}}
+
{{#set: common name=beta-glucosidase-like_chloroplastic}}
−
{{#set: gene associated=Tiso_gene_1154|Tiso_gene_11511|Tiso_gene_2581}}
+
{{#set: common name=ORF}}
−
{{#set: in pathway=GLUGLNSYN-PWY|PWY-6963}}
+
{{#set: common name=low_quality_protein:_beta-glucosidase-like_chloroplastic-like}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: common name=beta_glucosidase}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: ec number=EC-3.2.1.21}}
−
{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
+
{{#set: gene associated=Tiso_gene_2344|Tiso_gene_13305|Tiso_gene_15067|Tiso_gene_10001|Tiso_gene_13306|Tiso_gene_2843|Tiso_gene_8669|Tiso_gene_6188|Tiso_gene_15066|Tiso_gene_6497|Tiso_gene_5836|Tiso_gene_6007|Tiso_gene_6187|Tiso_gene_3467}}
−
{{#set: reconstruction category=manual}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction source=primary_network}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:05, 21 March 2018

Reaction 3.2.1.21-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • beta-glucosidase-like_chloroplastic
    • ORF
    • low_quality_protein:_beta-glucosidase-like_chloroplastic-like
    • beta_glucosidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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