Difference between revisions of "3.2.1.78-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16389 RXN-16389] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** long...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.78-RXN 3.2.1.78-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** endo-beta-_-mannanase...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16389 RXN-16389] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.78-RXN 3.2.1.78-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** polyketide_synthase
+
** endo-beta-_-mannanase
−
** long_chain_acyl-_synthetase
+
−
** acyl-_synthetase
+
−
** ORF
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
+
** [http://enzyme.expasy.org/EC/3.2.1.78 EC-3.2.1.78]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[16-HYDROXYPALMITATE]][c] '''=>''' 1 [[CPD-17621]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[1-4-Mannan]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[Short-Mannan]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 16-hydroxypalmitate[c] '''=>''' 1 16-hydroxypalmitoyl-CoA[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
+
** 1 a β-(1,4)-D-mannan[c] '''+''' 1 H2O[c] '''=>''' 2 a β-(1,4)-mannan oligosaccharide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_10876]]
+
* Gene: [[Tiso_gene_8816]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Tiso_gene_9394]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_4191]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_500]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_136]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_7855]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_135]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_348]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_13394]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-321]], cutin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-321 PWY-321]
+
* [[PWY-7456]], β-(1,4)-mannan degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7456 PWY-7456]
−
** '''3''' reactions found over '''16''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
+
−
** '''8''' reactions found over '''18''' reactions in the full pathway
+
−
* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
+
−
** '''9''' reactions found over '''19''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P16699 P16699]
 +
** [http://www.uniprot.org/uniprot/P22533 P22533]
 +
** [http://www.uniprot.org/uniprot/O66185 O66185]
 +
** [http://www.uniprot.org/uniprot/O48540 O48540]
 +
** [http://www.uniprot.org/uniprot/Q9M0H6 Q9M0H6]
 +
** [http://www.uniprot.org/uniprot/P49425 P49425]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=polyketide_synthase}}
+
{{#set: common name=endo-beta-_-mannanase}}
−
{{#set: common name=long_chain_acyl-_synthetase}}
+
{{#set: ec number=EC-3.2.1.78}}
−
{{#set: common name=acyl-_synthetase}}
+
{{#set: gene associated=Tiso_gene_8816}}
−
{{#set: common name=ORF}}
+
{{#set: in pathway=PWY-7456}}
−
{{#set: ec number=EC-6.2.1.3}}
+
−
{{#set: gene associated=Tiso_gene_10876|Tiso_gene_9394|Tiso_gene_4191|Tiso_gene_500|Tiso_gene_136|Tiso_gene_7855|Tiso_gene_135|Tiso_gene_348|Tiso_gene_13394}}
+
−
{{#set: in pathway=PWY-321|PWY-6733|PWY-1121}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:24, 21 March 2018

Reaction 3.2.1.78-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • endo-beta-_-mannanase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a β-(1,4)-D-mannan[c] + 1 H2O[c] => 2 a β-(1,4)-mannan oligosaccharide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7456, β-(1,4)-mannan degradation: PWY-7456
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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