Difference between revisions of "3.4.21.92-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_6815 == * left end position: ** 425 * transcription direction: ** POSITIVE * right end position: ** 4234 * centisome position: ** 3.6004744...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.92-RXN 3.4.21.92-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ATP-dependent Clp p...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_6815 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.92-RXN 3.4.21.92-RXN] ==
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* left end position:
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* direction:
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** 425
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** ATP-dependent Clp protease proteolytic subunit
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* right end position:
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* ec number:
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** 4234
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** [http://enzyme.expasy.org/EC/3.4.21.92 EC-3.4.21.92]
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* centisome position:
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** 3.6004744   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ASPAMINOTRANS-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 a protein[c] '''+''' 1 H2O[c] '''=>''' 1 a peptide[c]
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***ec-number
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** [[pantograph]]-[[synechocystis]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[CYSTEINE-AMINOTRANSFERASE-RXN]]
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* Gene: [[Tiso_gene_11705]]
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** experimental_annotation
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** Source: [[annotation-experimental_annotation]]
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***automated-name-match
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*** Assignment: AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[creinhardtii]]
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** Source: [[orthology-esiliculosus]]
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* [[PHEAMINOTRANS-RXN]]
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* Gene: [[Tiso_gene_999]]
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** [[pantograph]]-[[athaliana]]
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** Source: [[annotation-experimental_annotation]]
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** [[pantograph]]-[[synechocystis]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[creinhardtii]]
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** Source: [[orthology-esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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* Gene: [[Tiso_gene_10324]]
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* [[PREPHENATEDEHYDRAT-RXN]]
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** Source: [[annotation-experimental_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[RXN-10814]]
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** Source: [[orthology-esiliculosus]]
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** in-silico_annotation
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* Gene: [[Tiso_gene_10005]]
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***ec-number
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** Source: [[annotation-in-silico_annotation]]
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** experimental_annotation
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*** Assignment: AUTOMATED-NAME-MATCH
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***ec-number
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== Pathways  ==
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* [[RXN-11737]]
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== Reconstruction information  ==
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** in-silico_annotation
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* Category: [[orthology]]
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***ec-number
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** Source: [[orthology-esiliculosus]]
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** experimental_annotation
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*** Tool: [[pantograph]]
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***ec-number
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* Category: [[annotation]]
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** [[pantograph]]-[[creinhardtii]]
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** Source: [[annotation-experimental_annotation]]
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* [[RXN-13697]]
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*** Tool: [[pathwaytools]]
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** in-silico_annotation
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** Source: [[annotation-in-silico_annotation]]
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***ec-number
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*** Tool: [[pathwaytools]]
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** experimental_annotation
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−
***ec-number
+
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* [[TYROSINE-AMINOTRANSFERASE-RXN]]
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−
** [[pantograph]]-[[synechocystis]]
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−
== Pathways associated ==
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−
* [[TYRSYN]]
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−
* [[PWY-7383]]
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−
* [[ASPARTATESYN-PWY]]
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−
* [[PWY-7117]]
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−
* [[PWY-7115]]
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−
* [[PWY-5754]]
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−
* [[PWY-5329]]
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−
* [[PWY-5048]]
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−
* [[PWY-5913]]
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−
* [[PWY-6643]]
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−
* [[PWY-6642]]
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−
* [[PWY-7432]]
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−
* [[PWY-7518]]
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−
* [[ANAPHENOXI-PWY]]
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−
* [[MALATE-ASPARTATE-SHUTTLE-PWY]]
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−
* [[TYRFUMCAT-PWY]]
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−
* [[PWY-3581]]
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−
* [[ASPARTATE-DEG1-PWY]]
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−
* [[PWY0-1534]]
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−
* [[PWY-5886]]
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−
* [[GLUTDEG-PWY]]
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−
* [[PWY-6318]]
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−
* [[PWY-5079]]
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−
* [[PWY-7514]]
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* [[PWY3O-4108]]
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−
* [[PHESYN]]
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* [[PWY-6638]]
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* [[ASPARAGINE-DEG1-PWY-1]]
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−
* [[PWY-5151]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=425}}
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* UNIPROT:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/P12208 P12208]
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{{#set: right end position=4234}}
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** [http://www.uniprot.org/uniprot/Q9JU33 Q9JU33]
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{{#set: centisome position=3.6004744    }}
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** [http://www.uniprot.org/uniprot/Q9PE41 Q9PE41]
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{{#set: reaction associated=ASPAMINOTRANS-RXN|CYSTEINE-AMINOTRANSFERASE-RXN|PHEAMINOTRANS-RXN|PREPHENATEDEHYDRAT-RXN|RXN-10814|RXN-11737|RXN-13697|TYROSINE-AMINOTRANSFERASE-RXN}}
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** [http://www.uniprot.org/uniprot/P0A6G7 P0A6G7]
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{{#set: pathway associated=TYRSYN|PWY-7383|ASPARTATESYN-PWY|PWY-7117|PWY-7115|PWY-5754|PWY-5329|PWY-5048|PWY-5913|PWY-6643|PWY-6642|PWY-7432|PWY-7518|ANAPHENOXI-PWY|MALATE-ASPARTATE-SHUTTLE-PWY|TYRFUMCAT-PWY|PWY-3581|ASPARTATE-DEG1-PWY|PWY0-1534|PWY-5886|GLUTDEG-PWY|PWY-6318|PWY-5079|PWY-7514|PWY3O-4108|PHESYN|PWY-6638|ASPARAGINE-DEG1-PWY-1|PWY-5151}}
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** [http://www.uniprot.org/uniprot/P56156 P56156]
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** [http://www.uniprot.org/uniprot/P80244 P80244]
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** [http://www.uniprot.org/uniprot/O51556 O51556]
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** [http://www.uniprot.org/uniprot/O67357 O67357]
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** [http://www.uniprot.org/uniprot/O83520 O83520]
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** [http://www.uniprot.org/uniprot/Q9HYR9 Q9HYR9]
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** [http://www.uniprot.org/uniprot/P63783 P63783]
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** [http://www.uniprot.org/uniprot/O84712 O84712]
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** [http://www.uniprot.org/uniprot/P43867 P43867]
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** [http://www.uniprot.org/uniprot/O51698 O51698]
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** [http://www.uniprot.org/uniprot/P0A526 P0A526]
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** [http://www.uniprot.org/uniprot/Q9PLM0 Q9PLM0]
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** [http://www.uniprot.org/uniprot/Q9K709 Q9K709]
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** [http://www.uniprot.org/uniprot/Q9WZF9 Q9WZF9]
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** [http://www.uniprot.org/uniprot/Q9RSZ7 Q9RSZ7]
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** [http://www.uniprot.org/uniprot/Q9I2U1 Q9I2U1]
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** [http://www.uniprot.org/uniprot/Q9K888 Q9K888]
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** [http://www.uniprot.org/uniprot/P38002 P38002]
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** [http://www.uniprot.org/uniprot/Q9Z759 Q9Z759]
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** [http://www.uniprot.org/uniprot/Q9Z832 Q9Z832]
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** [http://www.uniprot.org/uniprot/P54413 P54413]
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** [http://www.uniprot.org/uniprot/Q9KQS6 Q9KQS6]
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** [http://www.uniprot.org/uniprot/Q9ZD29 Q9ZD29]
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** [http://www.uniprot.org/uniprot/Q9ZL50 Q9ZL50]
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** [http://www.uniprot.org/uniprot/P12209 P12209]
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** [http://www.uniprot.org/uniprot/Q7M2F6 Q7M2F6]
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** [http://www.uniprot.org/uniprot/P24064 P24064]
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** [http://www.uniprot.org/uniprot/P36387 P36387]
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** [http://www.uniprot.org/uniprot/P26567 P26567]
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** [http://www.uniprot.org/uniprot/P48883 P48883]
 +
** [http://www.uniprot.org/uniprot/Q16740 Q16740]
 +
** [http://www.uniprot.org/uniprot/P54416 P54416]
 +
** [http://www.uniprot.org/uniprot/Q59993 Q59993]
 +
** [http://www.uniprot.org/uniprot/P74467 P74467]
 +
** [http://www.uniprot.org/uniprot/P30063 P30063]
 +
** [http://www.uniprot.org/uniprot/Q36863 Q36863]
 +
** [http://www.uniprot.org/uniprot/Q42886 Q42886]
 +
** [http://www.uniprot.org/uniprot/P56317 P56317]
 +
** [http://www.uniprot.org/uniprot/P41609 P41609]
 +
** [http://www.uniprot.org/uniprot/Q9X7R9 Q9X7R9]
 +
** [http://www.uniprot.org/uniprot/O48931 O48931]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ATP-dependent Clp protease proteolytic subunit}}
 +
{{#set: ec number=EC-3.4.21.92}}
 +
{{#set: gene associated=Tiso_gene_11705|Tiso_gene_999|Tiso_gene_10324|Tiso_gene_10005}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:25, 21 March 2018

Reaction 3.4.21.92-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ATP-dependent Clp protease proteolytic subunit
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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