Difference between revisions of "3.6.4.4-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=ANAPHENOXI-PWY ANAPHENOXI-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.6.4.4-RXN 3.6.4.4-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** kinesin * ec number: **...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ANAPHENOXI-PWY ANAPHENOXI-PWY] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.6.4.4-RXN 3.6.4.4-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
+
 
* common name:
 
* common name:
−
** L-phenylalanine degradation II (anaerobic)
+
** kinesin
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.6.4.4 EC-3.6.4.4]
 
* Synonym(s):
 
* Synonym(s):
−
** anaerobic L-phenylalanine oxidation
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''2''' reactions found over '''3''' reactions in the full pathway
+
* With identifiers:
−
* [[PHEAMINOTRANS-RXN]]
+
** 1 [[ATP]][c] '''+''' 1 [[Kinesin-Microtubules-Complex]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Kinesin-Microtubules-Complex]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c]
−
** 7 associated gene(s):
+
* With common name(s):
−
*** [[Tiso_gene_13892]]
+
** 1 ATP[c] '''+''' 1 a kinesin-microtubules complex[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 a kinesin-microtubules complex[c] '''+''' 1 ADP[c] '''+''' 1 phosphate[c]
−
*** [[Tiso_gene_17809]]
+
 
−
*** [[Tiso_gene_17718]]
+
== Genes associated with this reaction  ==
−
*** [[Tiso_gene_13538]]
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[Tiso_gene_10680]]
+
* Gene: [[Tiso_gene_14940]]
−
*** [[Tiso_gene_6815]]
+
** Source: [[orthology-esiliculosus]]
−
*** [[Tiso_gene_15680]]
+
* Gene: [[Tiso_gene_5584]]
−
** 4 reconstruction source(s) associated:
+
** Source: [[orthology-esiliculosus]]
−
*** [[orthology-athaliana]]
+
* Gene: [[Tiso_gene_16240]]
−
*** [[orthology-creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[orthology-synechocystis]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
*** [[orthology-esiliculosus]]
+
* Gene: [[Tiso_gene_646]]
−
* [[PHENDEHYD-RXN]]
+
** Source: [[annotation-in-silico_annotation]]
−
** 0 associated gene:
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** 1 reconstruction source(s) associated:
+
* Gene: [[Tiso_gene_10355]]
−
*** [[annotation-in-silico_annotation]]
+
** Source: [[orthology-esiliculosus]]
−
== Reaction(s) not found ==
+
* Gene: [[Tiso_gene_1492]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=PHENYLPYRUVATE-DECARBOXYLASE-RXN PHENYLPYRUVATE-DECARBOXYLASE-RXN]
+
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_15652]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_6071]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_10356]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_2393]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_12881]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_18523]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_14941]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_10834]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_9800]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-4751}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: taxonomic range=TAX-1224}}
+
{{#set: common name=kinesin}}
−
{{#set: common name=L-phenylalanine degradation II (anaerobic)}}
+
{{#set: ec number=EC-3.6.4.4}}
−
{{#set: common name=anaerobic L-phenylalanine oxidation}}
+
{{#set: gene associated=Tiso_gene_14940|Tiso_gene_5584|Tiso_gene_16240|Tiso_gene_646|Tiso_gene_10355|Tiso_gene_1492|Tiso_gene_15652|Tiso_gene_6071|Tiso_gene_10356|Tiso_gene_2393|Tiso_gene_12881|Tiso_gene_18523|Tiso_gene_14941|Tiso_gene_10834|Tiso_gene_9800}}
−
{{#set: reaction found=2}}
+
{{#set: in pathway=}}
−
{{#set: total reaction=3}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: completion rate=67.0}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:22, 21 March 2018

Reaction 3.6.4.4-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • kinesin
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=3.6.4.4-RXN&oldid=41236"