Difference between revisions of "3OH-4P-OH-ALPHA-KETOBUTYRATE"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7676 RXN-7676] == * direction: ** LEFT-TO-RIGHT * common name: ** chlorophyllide-a monooxygenas...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTURIDYLYLTRANS-RXN GALACTURIDYLYLTRANS-RXN] == * direction: ** REVERSIBLE * ec number: ** [htt...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7676 RXN-7676] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTURIDYLYLTRANS-RXN GALACTURIDYLYLTRANS-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
* ec number:
−
** chlorophyllide-a monooxygenase
+
** [http://enzyme.expasy.org/EC/2.7.7.12 EC-2.7.7.12]
−
** rieske_2fe-2sdomainiss
+
−
** tic55_component_of_chloroplast_import_machinery
+
−
** isp_domain-containing_protein
+
 
* Synonym(s):
 
* Synonym(s):
−
** chlorophyllide a oxygenase
 
−
** chlorophyll-b synthase
 
−
** CAO
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CPD-7015]][c]
+
** 1 [[CPD-12575]][c] '''+''' 1 [[GALACTOSE-1P]][c] '''<=>''' 1 [[GLC-1-P]][c] '''+''' 1 [[CPD-14553]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 chlorophyllide a[c] '''+''' 1 NADPH[c] '''+''' 1 oxygen[c] '''=>''' 1 NADP+[c] '''+''' 1 H2O[c] '''+''' 1 71-hydroxychlorophyllide a[c]
+
** 1 UDP-&alpha;-D-glucose[c] '''+''' 1 &alpha;-D-galactose 1-phosphate[c] '''<=>''' 1 &alpha;-D-glucopyranose 1-phosphate[c] '''+''' 1 UDP-&alpha;-D-galactose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_152]]
+
* Gene: [[Tiso_gene_2435]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
−
* [[Tiso_gene_4002]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_13817]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_12611]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_8091]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5068]], chlorophyll cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5068 PWY-5068]
+
* [[PWY-6317]], D-galactose degradation I (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527]
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
Line 45: Line 29:
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22676 22676]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13989 13989]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08203 R08203]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00955 R00955]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* UNIPROT:
−
{{#set: common name=chlorophyllide-a monooxygenase}}
+
** [http://www.uniprot.org/uniprot/P43424 P43424]
−
{{#set: common name=rieske_2fe-2sdomainiss}}
+
** [http://www.uniprot.org/uniprot/P31764 P31764]
−
{{#set: common name=tic55_component_of_chloroplast_import_machinery}}
+
** [http://www.uniprot.org/uniprot/P07902 P07902]
−
{{#set: common name=isp_domain-containing_protein}}
+
** [http://www.uniprot.org/uniprot/P08431 P08431]
−
{{#set: common name=chlorophyllide a oxygenase|chlorophyll-b synthase|CAO}}
+
** [http://www.uniprot.org/uniprot/P09148 P09148]
−
{{#set: gene associated=Tiso_gene_152|Tiso_gene_4002|Tiso_gene_13817|Tiso_gene_12611|Tiso_gene_8091}}
+
** [http://www.uniprot.org/uniprot/P13212 P13212]
−
{{#set: in pathway=PWY-5068}}
+
** [http://www.uniprot.org/uniprot/P09580 P09580]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: ec number=EC-2.7.7.12}}
 +
{{#set: gene associated=Tiso_gene_2435}}
 +
{{#set: in pathway=PWY-6317|PWY66-422|PWY-6527}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:46, 21 March 2018

Reaction GALACTURIDYLYLTRANS-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UDP-α-D-glucose[c] + 1 α-D-galactose 1-phosphate[c] <=> 1 α-D-glucopyranose 1-phosphate[c] + 1 UDP-α-D-galactose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6317, D-galactose degradation I (Leloir pathway): PWY-6317
    • 5 reactions found over 5 reactions in the full pathway
  • PWY66-422, D-galactose degradation V (Leloir pathway): PWY66-422
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6527, stachyose degradation: PWY-6527
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=3OH-4P-OH-ALPHA-KETOBUTYRATE&oldid=36178"