Difference between revisions of "4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PALMITATE PALMITATE] == * smiles: ** CCCCCCCCCCCCCCCC([O-])=O * common name: ** palmitate * inc...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN 4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PALMITATE PALMITATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN 4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN] ==
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* smiles:
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* direction:
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** CCCCCCCCCCCCCCCC([O-])=O
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** palmitate
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** probable_gamma_hydroxybutyrate_dehydrogenase
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* inchi key:
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** gamma_hydroxybutyrate_dehydrogenase
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** InChIKey=IPCSVZSSVZVIGE-UHFFFAOYSA-M
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/1.1.1.61 EC-1.1.1.61]
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** 255.42   
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* Synonym(s):
 
* Synonym(s):
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** hexadecanoate (n-C16:0)
 
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** palmitic acid
 
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** hexadecanoate
 
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** hexadecanoic acid
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[FATTY-ACID-PEROXIDASE-RXN]]
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* With identifiers:
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* [[RXN-9623]]
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** 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[SUCC-S-ALD]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[4-HYDROXY-BUTYRATE]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[3.1.2.22-RXN]]
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** 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 succinate semialdehyde[c] '''=>''' 1 NAD+[c] '''+''' 1 4-hydroxybutanoate[c]
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* [[RXN-15065]]
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* [[PALMITOYL-COA-HYDROLASE-RXN]]
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== Genes associated with this reaction  ==
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* [[3.1.1.64-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RETINYL-PALMITATE-ESTERASE-RXN]]
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* Gene: [[Tiso_gene_777]]
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* [[RXN-9549]]
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** Source: [[annotation-in-silico_annotation]]
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== Reaction(s) of unknown directionality ==
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_91]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-5677]], succinate fermentation to butanoate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5677 PWY-5677]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5022]], 4-aminobutanoate degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5022 PWY-5022]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 57-10-3
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* RHEA:
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* Wikipedia : Palmitic_acid
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23948 23948]
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* BIGG : hdca
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R01644 R01644]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=504166 504166]
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* UNIPROT:
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* HMDB : HMDB00220
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** [http://www.uniprot.org/uniprot/Q59104 Q59104]
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* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00249 C00249]
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{{#set: common name=probable_gamma_hydroxybutyrate_dehydrogenase}}
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* CHEMSPIDER:
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{{#set: common name=gamma_hydroxybutyrate_dehydrogenase}}
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** [http://www.chemspider.com/Chemical-Structure.440215.html 440215]
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{{#set: ec number=EC-1.1.1.61}}
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* CHEBI:
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{{#set: gene associated=Tiso_gene_777|Tiso_gene_91}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=7896 7896]
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{{#set: in pathway=PWY-5677|PWY-5022}}
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* METABOLIGHTS : MTBLC7896
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{{#set: reconstruction category=annotation}}
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{{#set: smiles=CCCCCCCCCCCCCCCC([O-])=O}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: common name=palmitate}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: inchi key=InChIKey=IPCSVZSSVZVIGE-UHFFFAOYSA-M}}
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{{#set: molecular weight=255.42    }}
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{{#set: common name=hexadecanoate (n-C16:0)|palmitic acid|hexadecanoate|hexadecanoic acid}}
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{{#set: consumed by=FATTY-ACID-PEROXIDASE-RXN|RXN-9623}}
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{{#set: produced by=3.1.2.22-RXN|RXN-15065|PALMITOYL-COA-HYDROLASE-RXN|3.1.1.64-RXN|RETINYL-PALMITATE-ESTERASE-RXN|RXN-9549}}
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Latest revision as of 21:25, 21 March 2018

Reaction 4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • probable_gamma_hydroxybutyrate_dehydrogenase
    • gamma_hydroxybutyrate_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 NADH[c] + 1 succinate semialdehyde[c] => 1 NAD+[c] + 1 4-hydroxybutanoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5677, succinate fermentation to butanoate: PWY-5677
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-5022, 4-aminobutanoate degradation V: PWY-5022
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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