Difference between revisions of "4.2.2.10-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_4160 == * left end position: ** 3380 * transcription direction: ** POSITIVE * right end position: ** 6182 * centisome position: ** 22.06410...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16415 RXN-16415] == * direction: ** REVERSIBLE * common name: ** polyketide_synthase ** long_ch...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_4160 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16415 RXN-16415] ==
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* left end position:
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* direction:
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** 3380
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** REVERSIBLE
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* transcription direction:
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* common name:
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** POSITIVE
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** polyketide_synthase
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* right end position:
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** long_chain_acyl-_synthetase
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** 6182
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** acyl-_synthetase
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* centisome position:
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** ORF
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** 22.064104   
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[1.5.1.9-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[Very-long-chain-fatty-acids]][c] '''<=>''' 1 [[VERY-LONG-CHAIN-FATTY-ACYL-COA]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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***automated-name-match
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* With common name(s):
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** [[pantograph]]-[[esiliculosus]]
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** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 a very-long-chain fatty acid[c] '''<=>''' 1 a very long chain fatty acyl-CoA[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
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== Pathways associated ==
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* [[LYSINE-DEG1-PWY]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_500]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_135]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_7855]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_4191]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_13394]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_136]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_9394]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_348]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10876]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=3380}}
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{{#set: direction=REVERSIBLE}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=polyketide_synthase}}
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{{#set: right end position=6182}}
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{{#set: common name=long_chain_acyl-_synthetase}}
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{{#set: centisome position=22.064104    }}
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{{#set: common name=acyl-_synthetase}}
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{{#set: reaction associated=1.5.1.9-RXN}}
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{{#set: common name=ORF}}
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{{#set: pathway associated=LYSINE-DEG1-PWY}}
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{{#set: ec number=EC-6.2.1.3}}
 +
{{#set: gene associated=Tiso_gene_500|Tiso_gene_135|Tiso_gene_7855|Tiso_gene_4191|Tiso_gene_13394|Tiso_gene_136|Tiso_gene_9394|Tiso_gene_348|Tiso_gene_10876}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 17:06, 21 March 2018

Reaction RXN-16415

  • direction:
    • REVERSIBLE
  • common name:
    • polyketide_synthase
    • long_chain_acyl-_synthetase
    • acyl-_synthetase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=4.2.2.10-RXN&oldid=38734"