Difference between revisions of "4.3.1.17-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10083 RXN-10083] == * direction: ** LEFT-TO-RIGHT * common name: ** alpha_beta_hydrolase_fold_p...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.3.1.17-RXN 4.3.1.17-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10083 RXN-10083] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.3.1.17-RXN 4.3.1.17-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** alpha_beta_hydrolase_fold_protein
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.1.24 EC-3.1.1.24]
+
** [http://enzyme.expasy.org/EC/4.3.1.17 EC-4.3.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[CPD-10825]][c] '''=>''' 1 [[CPD-10826]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[SER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PYRUVATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 4-methyl-3-oxoadipate-enol-lactone[c] '''=>''' 1 4-methyl-3-oxoadipate[c] '''+''' 1 H+[c]
+
** 1 L-serine[c] '''=>''' 1 ammonium[c] '''+''' 1 pyruvate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10066]]
+
* Gene: [[Tiso_gene_12535]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-synechocystis]]
−
***EC-NUMBER
+
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6185]], 4-methylcatechol degradation (ortho cleavage): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6185 PWY-6185]
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19169 19169]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R09226 R09226]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00220 R00220]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q7M194 Q7M194]
 +
** [http://www.uniprot.org/uniprot/P30744 P30744]
 +
** [http://www.uniprot.org/uniprot/Q9JX54 Q9JX54]
 +
** [http://www.uniprot.org/uniprot/P56072 P56072]
 +
** [http://www.uniprot.org/uniprot/P25379 P25379]
 +
** [http://www.uniprot.org/uniprot/P16095 P16095]
 +
** [http://www.uniprot.org/uniprot/P20132 P20132]
 +
** [http://www.uniprot.org/uniprot/P09367 P09367]
 +
** [http://www.uniprot.org/uniprot/Q9PM51 Q9PM51]
 +
** [http://www.uniprot.org/uniprot/P17324 P17324]
 +
** [http://www.uniprot.org/uniprot/P80212 P80212]
 +
** [http://www.uniprot.org/uniprot/P80213 P80213]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=alpha_beta_hydrolase_fold_protein}}
+
{{#set: ec number=EC-4.3.1.17}}
−
{{#set: ec number=EC-3.1.1.24}}
+
{{#set: gene associated=Tiso_gene_12535}}
−
{{#set: gene associated=Tiso_gene_10066}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=PWY-6185}}
+
{{#set: reconstruction category=orthology|manual}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=manual-primary_network|orthology-creinhardtii|orthology-synechocystis}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:56, 21 March 2018

Reaction 4.3.1.17-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-serine[c] => 1 ammonium[c] + 1 pyruvate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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