Difference between revisions of "5.3.1.23-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSII-RXN PSII-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Photosystem II D2 protein * e...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13733 RXN-13733] == * direction: ** REVERSIBLE * common name: ** alkaline_dihydroceramidase * e...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSII-RXN PSII-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13733 RXN-13733] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Photosystem II D2 protein
+
** alkaline_dihydroceramidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.10.3.9 EC-1.10.3.9]
+
** [http://enzyme.expasy.org/EC/3.5.1.23 EC-3.5.1.23]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Light]][c] '''+''' 2 [[PLASTOQUINONE]][c] '''+''' 2 [[WATER]][c] '''+''' 4 [[PROTON]][e] '''=>''' 4 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[Plastoquinols]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[CPD3DJ-82]][c] '''<=>''' 1 [[CPD-13612]][c] '''+''' 1 [[Carboxylates]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 h&nu;[c] '''+''' 2 a plastoquinone[c] '''+''' 2 H2O[c] '''+''' 4 H+[e] '''=>''' 4 H+[c] '''+''' 1 oxygen[c] '''+''' 2 a plastoquinol[c]
+
** 1 H2O[c] '''+''' 1 a dihydroceramide[c] '''<=>''' 1 D-erythro-sphinganine[c] '''+''' 1 a carboxylate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5033]]
+
* Gene: [[Tiso_gene_14341]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_4555]]
−
* [[Tiso_gene_13951]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-101]], photosynthesis light reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-101 PWY-101]
+
* [[PWY-7119]], sphingolipid recycling and degradation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7119 PWY-7119]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
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*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
+
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30250 30250]
+
{{#set: common name=alkaline_dihydroceramidase}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: ec number=EC-3.5.1.23}}
−
{{#set: common name=Photosystem II D2 protein}}
+
{{#set: gene associated=Tiso_gene_14341|Tiso_gene_4555}}
−
{{#set: ec number=EC-1.10.3.9}}
+
{{#set: in pathway=PWY-7119}}
−
{{#set: gene associated=Tiso_gene_5033|Tiso_gene_13951}}
+
−
{{#set: in pathway=PWY-101}}
+
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 17:05, 21 March 2018

Reaction RXN-13733

  • direction:
    • REVERSIBLE
  • common name:
    • alkaline_dihydroceramidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 a dihydroceramide[c] <=> 1 D-erythro-sphinganine[c] + 1 a carboxylate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7119, sphingolipid recycling and degradation (yeast): PWY-7119
    • 5 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=5.3.1.23-RXN&oldid=38614"