Difference between revisions of "6MPURt"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE 5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE] == * smiles: *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8654 RXN-8654] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate-protein_ligase_a ** l...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE 5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8654 RXN-8654] ==
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* smiles:
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* direction:
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** C(NC=O)C(=[N+])NC1(C(O)C(O)C(COP([O-])(=O)[O-])O1)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=PMCOGCVKOAOZQM-XVFCMESISA-M
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* common name:
 
* common name:
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** 2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine
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** lipoate-protein_ligase_a
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* molecular weight:
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** lipoate-protein_ligase
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** 312.196   
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* Synonym(s):
 
* Synonym(s):
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** 5-phosphoribosyl-N-formylglycineamidine
 
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** 5'-phosphoribosyl-N-formyl glycineamidine
 
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** FGAM
 
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** 5'-phosphoribosylformylglycinamidine
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[AIRS-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[LIPOIC-ACID]][c] '''=>''' 1 [[LIPOYL-AMP]][c] '''+''' 1 [[PPI]][c]
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* [[FGAMSYN-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 ATP[c] '''+''' 1 H+[c] '''+''' 1 (R)-lipoate[c] '''=>''' 1 lipoyl-adenylate[c] '''+''' 1 diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_4493]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_4494]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_17215]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_8713]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_17216]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6984]], lipoate salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6984 PWY-6984]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY0-522]], lipoate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-522 PWY0-522]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIGAND-CPD:
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* RHEA:
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** [http://www.genome.jp/dbget-bin/www_bget?C04640 C04640]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12913 12913]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=18413 18413]
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** [http://www.genome.jp/dbget-bin/www_bget?R07770 R07770]
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* BIGG : fpram
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=lipoate-protein_ligase_a}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90657386 90657386]
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{{#set: common name=lipoate-protein_ligase}}
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* HMDB : HMDB06211
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{{#set: gene associated=Tiso_gene_4493|Tiso_gene_4494|Tiso_gene_17215|Tiso_gene_8713|Tiso_gene_17216}}
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{{#set: smiles=C(NC=O)C(=[N+])NC1(C(O)C(O)C(COP([O-])(=O)[O-])O1)}}
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{{#set: in pathway=PWY-6984|PWY0-522}}
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{{#set: inchi key=InChIKey=PMCOGCVKOAOZQM-XVFCMESISA-M}}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: molecular weight=312.196    }}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=5-phosphoribosyl-N-formylglycineamidine|5'-phosphoribosyl-N-formyl glycineamidine|FGAM|5'-phosphoribosylformylglycinamidine}}
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{{#set: consumed by=AIRS-RXN}}
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{{#set: produced by=FGAMSYN-RXN}}
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Revision as of 16:36, 21 March 2018

Reaction RXN-8654

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • lipoate-protein_ligase_a
    • lipoate-protein_ligase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 H+[c] + 1 (R)-lipoate[c] => 1 lipoyl-adenylate[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6984, lipoate salvage II: PWY-6984
    • 2 reactions found over 4 reactions in the full pathway
  • PWY0-522, lipoate salvage I: PWY0-522
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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