Difference between revisions of "6PGLUCONOLACT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DOLICHOL-KINASE-RXN DOLICHOL-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://e...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONOLACT-RXN 6PGLUCONOLACT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** 6-ph...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DOLICHOL-KINASE-RXN DOLICHOL-KINASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONOLACT-RXN 6PGLUCONOLACT-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** ORF
 +
** 6-phosphogluconolactonase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.108 EC-2.7.1.108]
+
** [http://enzyme.expasy.org/EC/3.1.1.31 EC-3.1.1.31]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CTP]][c] '''+''' 1 [[DOLICHOL]][c] '''=>''' 1 [[CDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[DOLICHOLP]][c]
+
** 1 [[D-6-P-GLUCONO-DELTA-LACTONE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-2961]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 CTP[c] '''+''' 1 a dolichol[c] '''=>''' 1 CDP[c] '''+''' 1 H+[c] '''+''' 1 a dolichyl phosphate[c]
+
** 1 6-phospho D-glucono-1,5-lactone[c] '''+''' 1 H2O[c] '''=>''' 1 D-gluconate 6-phosphate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_8073]]
+
* Gene: [[Tiso_gene_10799]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_20412]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5901]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_15950]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_8585]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6129]], dolichol and dolichyl phosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6129 PWY-6129]
+
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''14''' reactions found over '''18''' reactions in the full pathway
 +
* [[RUMP-PWY]], formaldehyde oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[OXIDATIVEPENT-PWY]], pentose phosphate pathway (oxidative branch) I: [http://metacyc.org/META/NEW-IMAGE?object=OXIDATIVEPENT-PWY OXIDATIVEPENT-PWY]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[GLYCOLYSIS-E-D]], superpathway of glycolysis and Entner-Doudoroff: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS-E-D GLYCOLYSIS-E-D]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13133 13133]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12556 12556]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01018 R01018]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02035 R02035]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P63337 P63337]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.7.1.108}}
+
{{#set: common name=ORF}}
−
{{#set: gene associated=Tiso_gene_8073}}
+
{{#set: common name=6-phosphogluconolactonase}}
−
{{#set: in pathway=PWY-6129}}
+
{{#set: ec number=EC-3.1.1.31}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: gene associated=Tiso_gene_10799|Tiso_gene_20412|Tiso_gene_5901|Tiso_gene_15950|Tiso_gene_8585}}
−
{{#set: reconstruction source=orthology-esiliculosus}}
+
{{#set: in pathway=P122-PWY|RUMP-PWY|OXIDATIVEPENT-PWY|GLYCOLYSIS-E-D}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|manual-primary_network|orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:52, 21 March 2018

Reaction 6PGLUCONOLACT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • 6-phosphogluconolactonase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P122-PWY, heterolactic fermentation: P122-PWY
    • 14 reactions found over 18 reactions in the full pathway
  • RUMP-PWY, formaldehyde oxidation I: RUMP-PWY
    • 3 reactions found over 6 reactions in the full pathway
  • OXIDATIVEPENT-PWY, pentose phosphate pathway (oxidative branch) I: OXIDATIVEPENT-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • GLYCOLYSIS-E-D, superpathway of glycolysis and Entner-Doudoroff: GLYCOLYSIS-E-D
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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