Difference between revisions of "ACETYL-COA-CARBOXYLTRANSFER-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-686 RXN1G-686] == * direction: ** LEFT-TO-RIGHT * common name: ** trans-delta2-cis,cis-delta9...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYL-COA-CARBOXYLTRANSFER-RXN ACETYL-COA-CARBOXYLTRANSFER-RXN] == * direction: ** LEFT-TO-RIGHT *...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-686 RXN1G-686] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYL-COA-CARBOXYLTRANSFER-RXN ACETYL-COA-CARBOXYLTRANSFER-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** trans-delta2-cis,cis-delta9,27-C46:3-[acyl-carrier protein] reductase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.1.M4 EC-1.3.1.M4]
+
** [http://enzyme.expasy.org/EC/6.4.1.2 EC-6.4.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[trans-D2-cis-cis-D9-27-C46-3-ACPs]][c] '''=>''' 1 [[cis-cis-D9-27-C46-2-ACPs]][c] '''+''' 1 [[NAD]][c]
+
** 1 [[ACETYL-COA]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 a trans-delta2-cis,cis-delta9,27-C46:3-[acp][c] '''=>''' 1 a cis,cis-delta9,27-C46:2-[acp][c] '''+''' 1 NAD+[c]
+
** 1 acetyl-CoA[c] '''+''' 1 ATP[c] '''+''' 1 hydrogencarbonate[c] '''=>''' 1 phosphate[c] '''+''' 1 malonyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10778]]
+
* Gene: [[Tiso_gene_2812]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_3800]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_5029]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_7965]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
+
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
−
** '''86''' reactions found over '''182''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6722]], candicidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6722 PWY-6722]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5743]], 3-hydroxypropanoate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743]
 +
** '''4''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-5744]], glyoxylate assimilation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5744 PWY-5744]
 +
** '''2''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
 +
** '''8''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-6679]], jadomycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6679 PWY-6679]
 +
** '''1''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-4381]], fatty acid biosynthesis initiation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4381 PWY-4381]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11308 11308]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00742 R00742]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=trans-delta2-cis,cis-delta9,27-C46:3-[acyl-carrier protein] reductase}}
+
{{#set: ec number=EC-6.4.1.2}}
−
{{#set: ec number=EC-1.3.1.M4}}
+
{{#set: gene associated=Tiso_gene_2812|Tiso_gene_3800|Tiso_gene_5029|Tiso_gene_7965}}
−
{{#set: gene associated=Tiso_gene_10778}}
+
{{#set: in pathway=PWY-7388|PWY-6722|PWY-5743|PWY-5744|PWY-5789|PWY-6679|PWY-4381}}
−
{{#set: in pathway=PWYG-321}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation|manual-primary_network|orthology-esiliculosus}}
−
{{#set: reconstruction source=orthology-esiliculosus}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 20:19, 21 March 2018

Reaction ACETYL-COA-CARBOXYLTRANSFER-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 acetyl-CoA[c] + 1 ATP[c] + 1 hydrogencarbonate[c] => 1 phosphate[c] + 1 malonyl-CoA[c] + 1 H+[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): PWY-7388
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6722, candicidin biosynthesis: PWY-6722
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5743, 3-hydroxypropanoate cycle: PWY-5743
    • 4 reactions found over 11 reactions in the full pathway
  • PWY-5744, glyoxylate assimilation: PWY-5744
    • 2 reactions found over 11 reactions in the full pathway
  • PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle: PWY-5789
    • 8 reactions found over 16 reactions in the full pathway
  • PWY-6679, jadomycin biosynthesis: PWY-6679
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-4381, fatty acid biosynthesis initiation I: PWY-4381
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




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