Difference between revisions of "ADENYLOSUCCINATE-SYNTHASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2Ot H2Ot] == * direction: ** REVERSIBLE * common name: ** H2O transport, extracellular * Synonym(s...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.18.1.2-RXN 1.18.1.2-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ferredoxin--nadp_embr...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2Ot H2Ot] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.18.1.2-RXN 1.18.1.2-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** H2O transport, extracellular
+
** ferredoxin--nadp_embryochloroplastic
 +
** ferredoxin--nadp_root_isozyme_chloroplastic
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.18.1.2 EC-1.18.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[WATER]][e] '''<=>''' 1.0 [[WATER]][c]
+
** 1 [[NADP]][c] '''+''' 2 [[Reduced-ferredoxins]][e] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADPH]][c] '''+''' 2 [[Oxidized-ferredoxins]][e]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H2O[e] '''<=>''' 1.0 H2O[c]
+
** 1 NADP+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[e] '''+''' 1 H+[c] '''=>''' 1 NADPH[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_11818]]
+
* Gene: [[Tiso_gene_20055]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17170]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17381]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_20054]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_20168]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_19031]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7230]], ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7230 PWY-7230]
 +
** '''1''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-101]], photosynthesis light reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-101 PWY-101]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-creinhardtii]]
+
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* LIGAND-RXN:
−
{{#set: common name=H2O transport, extracellular}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01195 R01195]
−
{{#set: gene associated=Tiso_gene_11818}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: in pathway=}}
+
{{#set: common name=ferredoxin--nadp_embryochloroplastic}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: common name=ferredoxin--nadp_root_isozyme_chloroplastic}}
−
{{#set: reconstruction source=orthology-creinhardtii}}
+
{{#set: ec number=EC-1.18.1.2}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: gene associated=Tiso_gene_20055|Tiso_gene_17170|Tiso_gene_17381|Tiso_gene_20054|Tiso_gene_20168|Tiso_gene_19031}}
 +
{{#set: in pathway=PWY-7230|PWY-101}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:51, 21 March 2018

Reaction 1.18.1.2-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ferredoxin--nadp_embryochloroplastic
    • ferredoxin--nadp_root_isozyme_chloroplastic
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7230, ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic): PWY-7230
    • 1 reactions found over 12 reactions in the full pathway
  • PWY-101, photosynthesis light reactions: PWY-101
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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