Difference between revisions of "ADENYLOSUCCINATE-SYNTHASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.18.1.2-RXN 1.18.1.2-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ferredoxin--nadp_embr...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYLOSUCCINATE-SYNTHASE-RXN ADENYLOSUCCINATE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.18.1.2-RXN 1.18.1.2-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYLOSUCCINATE-SYNTHASE-RXN ADENYLOSUCCINATE-SYNTHASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ferredoxin--nadp_embryochloroplastic
+
** adenylosuccinate_synthase
−
** ferredoxin--nadp_root_isozyme_chloroplastic
+
** adenylosuccinate_synthetase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.18.1.2 EC-1.18.1.2]
+
** [http://enzyme.expasy.org/EC/6.3.4.4 EC-6.3.4.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADP]][c] '''+''' 2 [[Reduced-ferredoxins]][e] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADPH]][c] '''+''' 2 [[Oxidized-ferredoxins]][e]
+
** 1 [[L-ASPARTATE]][c] '''+''' 1 [[IMP]][c] '''+''' 1 [[GTP]][c] '''=>''' 1 [[GDP]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADENYLOSUCC]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADP+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[e] '''+''' 1 H+[c] '''=>''' 1 NADPH[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[e]
+
** 1 L-aspartate[c] '''+''' 1 IMP[c] '''+''' 1 GTP[c] '''=>''' 1 GDP[c] '''+''' 2 H+[c] '''+''' 1 phosphate[c] '''+''' 1 adenylo-succinate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_20055]]
+
* Gene: [[Tiso_gene_743]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Tiso_gene_17170]]
+
** Source: [[orthology-synechocystis]]
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_17381]]
+
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
−
* Gene: [[Tiso_gene_20054]]
+
** Source: [[orthology-creinhardtii]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_6453]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_20168]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_19031]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7230]], ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7230 PWY-7230]
+
* [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7219 PWY-7219]
−
** '''1''' reactions found over '''12''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-101]], photosynthesis light reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-101 PWY-101]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
Line 51: Line 42:
 
** Source: [[manual-primary_network]]
 
** Source: [[manual-primary_network]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15753 15753]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01195 R01195]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01135 R01135]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P29726 P29726]
 +
** [http://www.uniprot.org/uniprot/P46664 P46664]
 +
** [http://www.uniprot.org/uniprot/Q57981 Q57981]
 +
** [http://www.uniprot.org/uniprot/P21900 P21900]
 +
** [http://www.uniprot.org/uniprot/P0A7D4 P0A7D4]
 +
** [http://www.uniprot.org/uniprot/P28650 P28650]
 +
** [http://www.uniprot.org/uniprot/Q9JV25 Q9JV25]
 +
** [http://www.uniprot.org/uniprot/P45283 P45283]
 +
** [http://www.uniprot.org/uniprot/Q9PMG4 Q9PMG4]
 +
** [http://www.uniprot.org/uniprot/Q9CE93 Q9CE93]
 +
** [http://www.uniprot.org/uniprot/P52151 P52151]
 +
** [http://www.uniprot.org/uniprot/P80210 P80210]
 +
** [http://www.uniprot.org/uniprot/Q49087 Q49087]
 +
** [http://www.uniprot.org/uniprot/O24578 O24578]
 +
** [http://www.uniprot.org/uniprot/Q96529 Q96529]
 +
** [http://www.uniprot.org/uniprot/O24396 O24396]
 +
** [http://www.uniprot.org/uniprot/Q02787 Q02787]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ferredoxin--nadp_embryochloroplastic}}
+
{{#set: common name=adenylosuccinate_synthase}}
−
{{#set: common name=ferredoxin--nadp_root_isozyme_chloroplastic}}
+
{{#set: common name=adenylosuccinate_synthetase}}
−
{{#set: ec number=EC-1.18.1.2}}
+
{{#set: ec number=EC-6.3.4.4}}
−
{{#set: gene associated=Tiso_gene_20055|Tiso_gene_17170|Tiso_gene_17381|Tiso_gene_20054|Tiso_gene_20168|Tiso_gene_19031}}
+
{{#set: gene associated=Tiso_gene_743|Tiso_gene_6453}}
−
{{#set: in pathway=PWY-7230|PWY-101}}
+
{{#set: in pathway=PWY-7219}}
 
{{#set: reconstruction category=orthology|manual|annotation}}
 
{{#set: reconstruction category=orthology|manual|annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:13, 21 March 2018

Reaction ADENYLOSUCCINATE-SYNTHASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • adenylosuccinate_synthase
    • adenylosuccinate_synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-aspartate[c] + 1 IMP[c] + 1 GTP[c] => 1 GDP[c] + 2 H+[c] + 1 phosphate[c] + 1 adenylo-succinate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7219, adenosine ribonucleotides de novo biosynthesis: PWY-7219
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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