Difference between revisions of "ADPREDUCT-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_3315 == * right end position: ** 16519 * transcription direction: ** POSITIVE * left end position: ** 14801 * centisome position: ** 86.911...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADPREDUCT-RXN ADPREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ADP reductase ** ri...")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_3315 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADPREDUCT-RXN ADPREDUCT-RXN] ==
−
* right end position:
+
* direction:
−
** 16519
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** ADP reductase
−
* left end position:
+
** ribonucleoside-diphosphate_reductase
−
** 14801
+
* ec number:
−
* centisome position:
+
** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
−
** 86.91133   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[3.5.1.98-RXN]]
+
* With identifiers:
 +
** 1 [[ADP]][c] '''+''' 1 [[Red-Thioredoxin]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[DADP]][c] '''+''' 1 [[Ox-Thioredoxin]][c]
 +
* With common name(s):
 +
** 1 ADP[c] '''+''' 1 a reduced thioredoxin[c] '''=>''' 1 H2O[c] '''+''' 1 dADP[c] '''+''' 1 an oxidized thioredoxin[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_9916]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_10617]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_10138]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_9915]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY-7220]], adenosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7220 PWY-7220]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7227]], adenosine deoxyribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7227 PWY-7227]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: automated-name-match
+
*** Tool: [[pathwaytools]]
−
== Pathways associated ==
+
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: right end position=16519}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28034 28034]
−
{{#set: left end position=14801}}
+
* LIGAND-RXN:
−
{{#set: centisome position=86.91133    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02017 R02017]
−
{{#set: reaction associated=3.5.1.98-RXN}}
+
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ADP reductase}}
 +
{{#set: common name=ribonucleoside-diphosphate_reductase}}
 +
{{#set: ec number=EC-1.17.4.1}}
 +
{{#set: gene associated=Tiso_gene_9916|Tiso_gene_10617|Tiso_gene_10138|Tiso_gene_9915}}
 +
{{#set: in pathway=PWY-7220|PWY-7227}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:24, 21 March 2018

Reaction ADPREDUCT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ADP reductase
    • ribonucleoside-diphosphate_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ADP[c] + 1 a reduced thioredoxin[c] => 1 H2O[c] + 1 dADP[c] + 1 an oxidized thioredoxin[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7220, adenosine deoxyribonucleotides de novo biosynthesis II: PWY-7220
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7227, adenosine deoxyribonucleotides de novo biosynthesis: PWY-7227
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ADPREDUCT-RXN&oldid=48482"