Difference between revisions of "AICARSYN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-DEHYDROPANTOATE-REDUCT-RXN 2-DEHYDROPANTOATE-REDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.9-RXN 3.4.11.9-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** xaa-pro_aminopeptidas...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-DEHYDROPANTOATE-REDUCT-RXN 2-DEHYDROPANTOATE-REDUCT-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.9-RXN 3.4.11.9-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 2-dehydropantoate_2-reductase
+
** xaa-pro_aminopeptidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.169 EC-1.1.1.169]
+
** [http://enzyme.expasy.org/EC/3.4.11.9 EC-3.4.11.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-DEHYDROPANTOATE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[L-PANTOATE]][c]
+
** 1 [[Peptides-holder]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c] '''+''' 1 [[Amino-Acids-20]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 2-dehydropantoate[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 (R)-pantoate[c]
+
** 1 a peptide[c] '''+''' 1 H2O[c] '''=>''' 1 a peptide[c] '''+''' 1 a proteinogenic amino acid[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10174]]
+
* Gene: [[Tiso_gene_16185]]
−
** [[pantograph]]-[[synechocystis]]
+
** Source: [[annotation-experimental_annotation]]
−
* [[Tiso_gene_12761]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_14456]]
−
***AUTOMATED-NAME-MATCH
+
** Source: [[annotation-experimental_annotation]]
−
* [[Tiso_gene_9392]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_13488]]
−
***AUTOMATED-NAME-MATCH
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_10173]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[synechocystis]]
+
** Source: [[annotation-experimental_annotation]]
−
* [[Tiso_gene_16426]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_13489]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_12762]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PANTO-PWY]], phosphopantothenate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PANTO-PWY PANTO-PWY]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6654]], phosphopantothenate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6654 PWY-6654]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16233 16233]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02472 R02472]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9CFY8 Q9CFY8]
+
** [http://www.uniprot.org/uniprot/P44881 P44881]
−
** [http://www.uniprot.org/uniprot/Q9V0N0 Q9V0N0]
+
** [http://www.uniprot.org/uniprot/P15034 P15034]
 +
** [http://www.uniprot.org/uniprot/P47566 P47566]
 +
** [http://www.uniprot.org/uniprot/P0A3Z2 P0A3Z2]
 +
** [http://www.uniprot.org/uniprot/Q95333 Q95333]
 +
** [http://www.uniprot.org/uniprot/Q09795 Q09795]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=2-dehydropantoate_2-reductase}}
+
{{#set: common name=xaa-pro_aminopeptidase}}
−
{{#set: ec number=EC-1.1.1.169}}
+
{{#set: ec number=EC-3.4.11.9}}
−
{{#set: gene associated=Tiso_gene_10174|Tiso_gene_12761|Tiso_gene_9392|Tiso_gene_10173|Tiso_gene_16426|Tiso_gene_12762}}
+
{{#set: gene associated=Tiso_gene_16185|Tiso_gene_14456|Tiso_gene_13488|Tiso_gene_13489}}
−
{{#set: in pathway=PANTO-PWY|PWY-6654}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-synechocystis}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}

Revision as of 17:09, 21 March 2018

Reaction 3.4.11.9-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • xaa-pro_aminopeptidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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