Difference between revisions of "ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2044 RXN0-2044] == * direction: ** REVERSIBLE * common name: ** hydroxyacyl-coenzyme_a_dehydro...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12547 RXN-12547] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2044 RXN0-2044] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12547 RXN-12547] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
+
−
** 3-hydroxyacyl-_dehydrogenase
+
−
** hydroxyacyl-coenzyme_a_mitochondrial
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
+
** [http://enzyme.expasy.org/EC/2.3.1.76 EC-2.3.1.76]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[3-HYDROXYADIPYL-COA]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[3-KETO-ADIPYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
+
** 1 [[PALMITYL-COA]][c] '''+''' 1 [[CPD-13524]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CHOCOLA_A]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (3S)-hydroxyadipyl-CoA[c] '''+''' 1 NAD+[c] '''<=>''' 1 3-oxoadipyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
+
** 1 palmitoyl-CoA[c] '''+''' 1 all-trans-retinol[c] '''=>''' 1 coenzyme A[c] '''+''' 1 all-trans-retinyl palmitate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_14026]]
+
* [[Tiso_gene_3902]]
−
** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[creinhardtii]]
−
***EC-NUMBER
+
* [[Tiso_gene_8889]]
−
** EXPERIMENTAL_ANNOTATION
+
** [[pantograph]]-[[creinhardtii]]
−
***EC-NUMBER
+
* [[Tiso_gene_20057]]
−
** [[pantograph]]-[[esiliculosus]]
+
** [[pantograph]]-[[creinhardtii]]
−
* [[Tiso_gene_18838]]
+
* [[Tiso_gene_20058]]
−
** IN-SILICO_ANNOTATION
+
** [[pantograph]]-[[creinhardtii]]
−
***EC-NUMBER
+
−
* [[Tiso_gene_14027]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_18839]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_14262]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_5857]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-1361]], benzoyl-CoA degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1361 PWY-1361]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY0-321]], phenylacetate degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-321 PWY0-321]
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[esiliculosus]]
+
*** [[creinhardtii]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34851 34851]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R06941 R06941]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02367 R02367]
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
+
{{#set: ec number=EC-2.3.1.76}}
−
{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
+
{{#set: gene associated=Tiso_gene_3902|Tiso_gene_8889|Tiso_gene_20057|Tiso_gene_20058}}
−
{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
+
{{#set: in pathway=}}
−
{{#set: ec number=EC-1.1.1.35}}
+
−
{{#set: gene associated=Tiso_gene_14026|Tiso_gene_18838|Tiso_gene_14027|Tiso_gene_18839|Tiso_gene_14262|Tiso_gene_5857}}
+
−
{{#set: in pathway=PWY-1361|PWY0-321}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction source=creinhardtii}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 18:37, 10 January 2018

Reaction RXN-12547

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 palmitoyl-CoA[c] + 1 all-trans-retinol[c] => 1 coenzyme A[c] + 1 all-trans-retinyl palmitate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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