Difference between revisions of "ALCOHOL-DEHYDROG-GENERIC-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN] == * direction: ** R...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALCOHOL-DEHYDROG-GENERIC-RXN ALCOHOL-DEHYDROG-GENERIC-RXN] == * direction: ** REVERSIBLE * common n...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALCOHOL-DEHYDROG-GENERIC-RXN ALCOHOL-DEHYDROG-GENERIC-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
 
** polyketide_synthase
 
** polyketide_synthase
 +
** ORF
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.3.10 EC-2.3.3.10]
+
** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[ACETOACETYL-COA]][c] '''+''' 1 [[ACETYL-COA]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c] '''+''' 1 [[CO-A]][c]
+
** 1 [[Primary-Alcohols]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[Aldehydes]][c] '''+''' 1 [[NADH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 acetoacetyl-CoA[c] '''+''' 1 acetyl-CoA[c] '''<=>''' 1 H+[c] '''+''' 1 (S)-3-hydroxy-3-methylglutaryl-CoA[c] '''+''' 1 coenzyme A[c]
+
** 1 a primary alcohol[c] '''+''' 1 NAD+[c] '''<=>''' 1 H+[c] '''+''' 1 an aldehyde[c] '''+''' 1 NADH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_9236]]
+
* Gene: [[Tiso_gene_5425]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6563]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6562]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_7649]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5424]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[Tiso_gene_14303]]
 
−
** Source: [[orthology-athaliana]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
* Gene: [[Tiso_gene_8563]]
 
−
** Source: [[orthology-esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY66-367]], ketogenesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-367 PWY66-367]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6174]], mevalonate pathway II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7571]], ferrichrome A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7571 PWY-7571]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7524]], mevalonate pathway III (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7524 PWY-7524]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
Line 49: Line 40:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10188 10188]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10739 10739]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01978 R01978]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07326 R07326]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P13704 P13704]
+
** [http://www.uniprot.org/uniprot/P04707 P04707]
−
** [http://www.uniprot.org/uniprot/P22791 P22791]
+
** [http://www.uniprot.org/uniprot/P21898 P21898]
−
** [http://www.uniprot.org/uniprot/P54870 P54870]
+
** [http://www.uniprot.org/uniprot/P07160 P07160]
−
** [http://www.uniprot.org/uniprot/P54869 P54869]
+
** [http://www.uniprot.org/uniprot/P07754 P07754]
−
** [http://www.uniprot.org/uniprot/O51626 O51626]
+
** [http://www.uniprot.org/uniprot/P06758 P06758]
−
** [http://www.uniprot.org/uniprot/Q9CFA9 Q9CFA9]
+
** [http://www.uniprot.org/uniprot/P06757 P06757]
−
** [http://www.uniprot.org/uniprot/P17425 P17425]
+
** [http://www.uniprot.org/uniprot/Q64564 Q64564]
−
** [http://www.uniprot.org/uniprot/Q7LZE7 Q7LZE7]
+
** [http://www.uniprot.org/uniprot/P08843 P08843]
−
** [http://www.uniprot.org/uniprot/Q01581 Q01581]
+
** [http://www.uniprot.org/uniprot/P14940 P14940]
−
** [http://www.uniprot.org/uniprot/P54961 P54961]
+
** [http://www.uniprot.org/uniprot/P19854 P19854]
−
** [http://www.uniprot.org/uniprot/P54839 P54839]
+
** [http://www.uniprot.org/uniprot/P20368 P20368]
−
** [http://www.uniprot.org/uniprot/P54874 P54874]
+
** [http://www.uniprot.org/uniprot/P19631 P19631]
−
** [http://www.uniprot.org/uniprot/P54868 P54868]
+
** [http://www.uniprot.org/uniprot/P22797 P22797]
−
** [http://www.uniprot.org/uniprot/P54873 P54873]
+
** [http://www.uniprot.org/uniprot/P22246 P22246]
−
** [http://www.uniprot.org/uniprot/P93773 P93773]
+
** [http://www.uniprot.org/uniprot/Q05847 Q05847]
 +
** [http://www.uniprot.org/uniprot/Q09009 Q09009]
 +
** [http://www.uniprot.org/uniprot/Q03384 Q03384]
 +
** [http://www.uniprot.org/uniprot/P26325 P26325]
 +
** [http://www.uniprot.org/uniprot/P12311 P12311]
 +
** [http://www.uniprot.org/uniprot/P39462 P39462]
 +
** [http://www.uniprot.org/uniprot/P25988 P25988]
 +
** [http://www.uniprot.org/uniprot/Q64673 Q64673]
 +
** [http://www.uniprot.org/uniprot/P41680 P41680]
 +
** [http://www.uniprot.org/uniprot/P33744 P33744]
 +
** [http://www.uniprot.org/uniprot/P81431 P81431]
 +
** [http://www.uniprot.org/uniprot/Q64437 Q64437]
 +
** [http://www.uniprot.org/uniprot/P28474 P28474]
 +
** [http://www.uniprot.org/uniprot/P17648 P17648]
 +
** [http://www.uniprot.org/uniprot/Q7M1S7 Q7M1S7]
 +
** [http://www.uniprot.org/uniprot/P23361 P23361]
 +
** [http://www.uniprot.org/uniprot/P07161 P07161]
 +
** [http://www.uniprot.org/uniprot/P33010 P33010]
 +
** [http://www.uniprot.org/uniprot/P41681 P41681]
 +
** [http://www.uniprot.org/uniprot/P23277 P23277]
 +
** [http://www.uniprot.org/uniprot/Q09010 Q09010]
 +
** [http://www.uniprot.org/uniprot/P23278 P23278]
 +
** [http://www.uniprot.org/uniprot/P25437 P25437]
 +
** [http://www.uniprot.org/uniprot/O06012 O06012]
 +
** [http://www.uniprot.org/uniprot/P10127 P10127]
 +
** [http://www.uniprot.org/uniprot/P00330 P00330]
 +
** [http://www.uniprot.org/uniprot/P00331 P00331]
 +
** [http://www.uniprot.org/uniprot/P23991 P23991]
 +
** [http://www.uniprot.org/uniprot/P0A9Q7 P0A9Q7]
 +
** [http://www.uniprot.org/uniprot/P00334 P00334]
 +
** [http://www.uniprot.org/uniprot/P10807 P10807]
 +
** [http://www.uniprot.org/uniprot/P00327 P00327]
 +
** [http://www.uniprot.org/uniprot/P00328 P00328]
 +
** [http://www.uniprot.org/uniprot/P28332 P28332]
 +
** [http://www.uniprot.org/uniprot/P07327 P07327]
 +
** [http://www.uniprot.org/uniprot/P00325 P00325]
 +
** [http://www.uniprot.org/uniprot/P00326 P00326]
 +
** [http://www.uniprot.org/uniprot/P08319 P08319]
 +
** [http://www.uniprot.org/uniprot/P40394 P40394]
 +
** [http://www.uniprot.org/uniprot/P11766 P11766]
 +
** [http://www.uniprot.org/uniprot/P14219 P14219]
 +
** [http://www.uniprot.org/uniprot/P13603 P13603]
 +
** [http://www.uniprot.org/uniprot/P00329 P00329]
 +
** [http://www.uniprot.org/uniprot/P06525 P06525]
 +
** [http://www.uniprot.org/uniprot/P25141 P25141]
 +
** [http://www.uniprot.org/uniprot/P14675 P14675]
 +
** [http://www.uniprot.org/uniprot/P14674 P14674]
 +
** [http://www.uniprot.org/uniprot/P14673 P14673]
 +
** [http://www.uniprot.org/uniprot/P12711 P12711]
 +
** [http://www.uniprot.org/uniprot/P18332 P18332]
 +
** [http://www.uniprot.org/uniprot/P00332 P00332]
 +
** [http://www.uniprot.org/uniprot/P22245 P22245]
 +
** [http://www.uniprot.org/uniprot/P77316 P77316]
 +
** [http://www.uniprot.org/uniprot/Q9JRB0 Q9JRB0]
 +
** [http://www.uniprot.org/uniprot/Q9CEN0 Q9CEN0]
 +
** [http://www.uniprot.org/uniprot/P44557 P44557]
 +
** [http://www.uniprot.org/uniprot/Q9K0P0 Q9K0P0]
 +
** [http://www.uniprot.org/uniprot/Q9JVR8 Q9JVR8]
 +
** [http://www.uniprot.org/uniprot/P28469 P28469]
 +
** [http://www.uniprot.org/uniprot/Q64533 Q64533]
 +
** [http://www.uniprot.org/uniprot/Q64415 Q64415]
 +
** [http://www.uniprot.org/uniprot/Q40249 Q40249]
 +
** [http://www.uniprot.org/uniprot/P79896 P79896]
 +
** [http://www.uniprot.org/uniprot/Q06099 Q06099]
 +
** [http://www.uniprot.org/uniprot/Q07588 Q07588]
 +
** [http://www.uniprot.org/uniprot/P51635 P51635]
 +
** [http://www.uniprot.org/uniprot/P20306 P20306]
 +
** [http://www.uniprot.org/uniprot/Q7M4Z9 Q7M4Z9]
 +
** [http://www.uniprot.org/uniprot/P12886 P12886]
 +
** [http://www.uniprot.org/uniprot/P05336 P05336]
 +
** [http://www.uniprot.org/uniprot/P09369 P09369]
 +
** [http://www.uniprot.org/uniprot/P09370 P09370]
 +
** [http://www.uniprot.org/uniprot/P10847 P10847]
 +
** [http://www.uniprot.org/uniprot/P10848 P10848]
 +
** [http://www.uniprot.org/uniprot/P00333 P00333]
 +
** [http://www.uniprot.org/uniprot/Q43264 Q43264]
 +
** [http://www.uniprot.org/uniprot/P12854 P12854]
 +
** [http://www.uniprot.org/uniprot/Q6LCE4 Q6LCE4]
 +
** [http://www.uniprot.org/uniprot/P84328 P84328]
 +
** [http://www.uniprot.org/uniprot/Q9GN94 Q9GN94]
 +
** [http://www.uniprot.org/uniprot/P20369 P20369]
 +
** [http://www.uniprot.org/uniprot/P07162 P07162]
 +
** [http://www.uniprot.org/uniprot/P07159 P07159]
 +
** [http://www.uniprot.org/uniprot/P23237 P23237]
 +
** [http://www.uniprot.org/uniprot/P23236 P23236]
 +
** [http://www.uniprot.org/uniprot/P25139 P25139]
 +
** [http://www.uniprot.org/uniprot/P49384 P49384]
 +
** [http://www.uniprot.org/uniprot/Q24641 Q24641]
 +
** [http://www.uniprot.org/uniprot/P26719 P26719]
 +
** [http://www.uniprot.org/uniprot/P30350 P30350]
 +
** [http://www.uniprot.org/uniprot/P49383 P49383]
 +
** [http://www.uniprot.org/uniprot/P37473 P37473]
 +
** [http://www.uniprot.org/uniprot/Q27595 Q27595]
 +
** [http://www.uniprot.org/uniprot/Q03505 Q03505]
 +
** [http://www.uniprot.org/uniprot/P32771 P32771]
 +
** [http://www.uniprot.org/uniprot/Q07288 Q07288]
 +
** [http://www.uniprot.org/uniprot/P42328 P42328]
 +
** [http://www.uniprot.org/uniprot/P38113 P38113]
 +
** [http://www.uniprot.org/uniprot/P48815 P48815]
 +
** [http://www.uniprot.org/uniprot/P42327 P42327]
 +
** [http://www.uniprot.org/uniprot/P37686 P37686]
 +
** [http://www.uniprot.org/uniprot/P80338 P80338]
 +
** [http://www.uniprot.org/uniprot/P50381 P50381]
 +
** [http://www.uniprot.org/uniprot/P80360 P80360]
 +
** [http://www.uniprot.org/uniprot/P46415 P46415]
 +
** [http://www.uniprot.org/uniprot/P28032 P28032]
 +
** [http://www.uniprot.org/uniprot/Q41241 Q41241]
 +
** [http://www.uniprot.org/uniprot/Q41242 Q41242]
 +
** [http://www.uniprot.org/uniprot/P43067 P43067]
 +
** [http://www.uniprot.org/uniprot/Q07321 Q07321]
 +
** [http://www.uniprot.org/uniprot/Q43016 Q43016]
 +
** [http://www.uniprot.org/uniprot/P07246 P07246]
 +
** [http://www.uniprot.org/uniprot/Q09669 Q09669]
 +
** [http://www.uniprot.org/uniprot/Q59399 Q59399]
 +
** [http://www.uniprot.org/uniprot/P48977 P48977]
 +
** [http://www.uniprot.org/uniprot/Q42953 Q42953]
 +
** [http://www.uniprot.org/uniprot/P25405 P25405]
 +
** [http://www.uniprot.org/uniprot/P25406 P25406]
 +
** [http://www.uniprot.org/uniprot/P80512 P80512]
 +
** [http://www.uniprot.org/uniprot/P54202 P54202]
 +
** [http://www.uniprot.org/uniprot/Q7LZI0 Q7LZI0]
 +
** [http://www.uniprot.org/uniprot/P49645 P49645]
 +
** [http://www.uniprot.org/uniprot/Q64563 Q64563]
 +
** [http://www.uniprot.org/uniprot/P80467 P80467]
 +
** [http://www.uniprot.org/uniprot/Q96533 Q96533]
 +
** [http://www.uniprot.org/uniprot/Q26653 Q26653]
 +
** [http://www.uniprot.org/uniprot/Q42764 Q42764]
 +
** [http://www.uniprot.org/uniprot/Q39782 Q39782]
 +
** [http://www.uniprot.org/uniprot/Q39783 Q39783]
 +
** [http://www.uniprot.org/uniprot/Q42765 Q42765]
 +
** [http://www.uniprot.org/uniprot/Q7LZ46 Q7LZ46]
 +
** [http://www.uniprot.org/uniprot/P73138 P73138]
 +
** [http://www.uniprot.org/uniprot/Q41767 Q41767]
 +
** [http://www.uniprot.org/uniprot/Q43169 Q43169]
 +
** [http://www.uniprot.org/uniprot/O49054 O49054]
 +
** [http://www.uniprot.org/uniprot/O49061 O49061]
 +
** [http://www.uniprot.org/uniprot/O49053 O49053]
 +
** [http://www.uniprot.org/uniprot/O49058 O49058]
 +
** [http://www.uniprot.org/uniprot/O82791 O82791]
 +
** [http://www.uniprot.org/uniprot/O94038 O94038]
 +
** [http://www.uniprot.org/uniprot/O45687 O45687]
 +
** [http://www.uniprot.org/uniprot/Q17334 Q17334]
 +
** [http://www.uniprot.org/uniprot/Q9UAT1 Q9UAT1]
 +
** [http://www.uniprot.org/uniprot/Q9RI47 Q9RI47]
 +
** [http://www.uniprot.org/uniprot/P78870 P78870]
 +
** [http://www.uniprot.org/uniprot/O74540 O74540]
 +
** [http://www.uniprot.org/uniprot/O65459 O65459]
 +
** [http://www.uniprot.org/uniprot/Q9P6C8 Q9P6C8]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
 
{{#set: common name=polyketide_synthase}}
 
{{#set: common name=polyketide_synthase}}
−
{{#set: ec number=EC-2.3.3.10}}
+
{{#set: common name=ORF}}
−
{{#set: gene associated=Tiso_gene_9236|Tiso_gene_14303|Tiso_gene_8563}}
+
{{#set: ec number=EC-1.1.1.1}}
−
{{#set: in pathway=PWY66-367|PWY-6174|PWY-922|PWY-7391|PWY-7571|PWY-7524}}
+
{{#set: gene associated=Tiso_gene_5425|Tiso_gene_6563|Tiso_gene_6562|Tiso_gene_7649|Tiso_gene_5424}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:24, 21 March 2018

Reaction ALCOHOL-DEHYDROG-GENERIC-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • polyketide_synthase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a primary alcohol[c] + 1 NAD+[c] <=> 1 H+[c] + 1 an aldehyde[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ALCOHOL-DEHYDROG-GENERIC-RXN&oldid=41425"