Difference between revisions of "ANAGLYCOLYSIS-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOGENTISATE-12-DIOXYGENASE-RXN HOMOGENTISATE-12-DIOXYGENASE-RXN] == * direction: ** LEFT-TO-RIGHT...")
 
(Created page with "Category:Gene == Gene Tiso_gene_2298 == * left end position: ** 6059 * transcription direction: ** POSITIVE * right end position: ** 7264 * centisome position: ** 30.47173...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOGENTISATE-12-DIOXYGENASE-RXN HOMOGENTISATE-12-DIOXYGENASE-RXN] ==
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== Gene Tiso_gene_2298 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 6059
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* common name:
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* transcription direction:
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** homogentisate_-dioxygenase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.13.11.5 EC-1.13.11.5]
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** 7264
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* centisome position:
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** 30.471737   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ALANINE--TRNA-LIGASE-RXN]]
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** 1 [[HOMOGENTISATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[4-MALEYL-ACETOACETATE]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 homogentisate[c] '''+''' 1 oxygen[c] '''=>''' 1 H+[c] '''+''' 1 4-maleyl-acetoacetate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_20095]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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== Pathways associated ==
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* [[TYRFUMCAT-PWY]], L-tyrosine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=TYRFUMCAT-PWY TYRFUMCAT-PWY]
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* [[TRNA-CHARGING-PWY]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=6059}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15449 15449]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=7264}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02519 R02519]
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{{#set: centisome position=30.471737    }}
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* UNIPROT:
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{{#set: reaction associated=ALANINE--TRNA-LIGASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9Y041 Q9Y041]
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=homogentisate_-dioxygenase}}
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{{#set: ec number=EC-1.13.11.5}}
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{{#set: gene associated=Tiso_gene_20095}}
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{{#set: in pathway=TYRFUMCAT-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 16:38, 10 January 2018

Gene Tiso_gene_2298

  • left end position:
    • 6059
  • transcription direction:
    • POSITIVE
  • right end position:
    • 7264
  • centisome position:
    • 30.471737
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ANAGLYCOLYSIS-PWY&oldid=9858"