Difference between revisions of "ARABCAT-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTONOLACTONE-DEHYDROGENASE-RXN GALACTONOLACTONE-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO-R...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=ARABCAT-PWY ARABCAT-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTONOLACTONE-DEHYDROGENASE-RXN GALACTONOLACTONE-DEHYDROGENASE-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ARABCAT-PWY ARABCAT-PWY] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** mitochondrial_l-galactono-_-lactone_dehydrogenase
+
** L-arabinose degradation I
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.3.2.3 EC-1.3.2.3]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** L-arabinose catabolism
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''1''' reactions found over '''3''' reactions in the full pathway
−
** 1 [[CPD-330]][c] '''+''' 2 [[Cytochromes-C-Oxidized]][c] '''=>''' 1 [[ASCORBATE]][c] '''+''' 3 [[PROTON]][c] '''+''' 2 [[Cytochromes-C-Reduced]][c]
+
* [[RXN0-5116]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 L-galactono-1,4-lactone[c] '''+''' 2 an oxidized c-type cytochrome[c] '''=>''' 1 L-ascorbate[c] '''+''' 3 H+[c] '''+''' 2 a reduced c-type cytochrome[c]
+
*** [[Tiso_gene_16670]]
−
 
+
** 1 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[annotation-in-silico_annotation]]
−
Genes have been associated with this reaction based on different elements listed below.
+
== Reaction(s) not found ==
−
* Gene: [[Tiso_gene_210]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=ARABISOM-RXN ARABISOM-RXN]
−
** Source: [[annotation-in-silico_annotation]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RIBULPEPIM-RXN RIBULPEPIM-RXN]
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-esiliculosus]]
+
−
== Pathways  ==
+
−
* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882]
+
−
** '''6''' reactions found over '''8''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
* ECOCYC:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00640 R00640]
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=ARABCAT-PWY ARABCAT-PWY]
−
* UNIPROT:
+
{{#set: taxonomic range=TAX-2}}
−
** [http://www.uniprot.org/uniprot/Q9SU56 Q9SU56]
+
{{#set: common name=L-arabinose degradation I}}
−
** [http://www.uniprot.org/uniprot/O47881 O47881]
+
{{#set: common name=L-arabinose catabolism}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction found=1}}
−
{{#set: common name=mitochondrial_l-galactono-_-lactone_dehydrogenase}}
+
{{#set: total reaction=3}}
−
{{#set: ec number=EC-1.3.2.3}}
+
{{#set: completion rate=33.0}}
−
{{#set: gene associated=Tiso_gene_210}}
+
−
{{#set: in pathway=PWY-882}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:49, 21 March 2018

Pathway ARABCAT-PWY

  • taxonomic range:
  • common name:
    • L-arabinose degradation I
  • Synonym(s):
    • L-arabinose catabolism

Reaction(s) found

1 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ARABCAT-PWY&oldid=43937"