Difference between revisions of "ASPARAGINE--TRNA-LIGASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2001 RXN-2001] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/6....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5437 PWY-5437] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2001 RXN-2001] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5437 PWY-5437] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/6.2.1 EC-6.2.1]
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** L-threonine degradation I
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''6''' reactions in the full pathway
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** 1 [[CPD-674]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[CINNAMOYL-COA]][c]
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* [[RXN-15121]]
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* With common name(s):
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** 0 associated gene:
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** 1 trans-cinnamate[c] '''+''' 1 coenzyme A[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 (E)-cinnamoyl-CoA[c]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-15122]]
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* [[Tiso_gene_14183]]
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** 3 associated gene(s):
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_8525]]
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* [[Tiso_gene_12275]]
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*** [[Tiso_gene_17207]]
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** [[pantograph]]-[[athaliana]]
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*** [[Tiso_gene_12535]]
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** [[pantograph]]-[[esiliculosus]]
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** 3 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-experimental_annotation]]
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* [[PWY-6457]], trans-cinnamoyl-CoA biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6457 PWY-6457]
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*** [[annotation-in-silico_annotation]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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*** [[orthology-esiliculosus]]
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== Reconstruction information  ==
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* [[RXN-15123]]
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* Category: [[orthology]]
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** 0 associated gene:
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** Source: [[orthology-athaliana]]
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** 2 reconstruction source(s) associated:
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*** Tool: [[pantograph]]
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*** [[annotation-experimental_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** Tool: [[pantograph]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=KETOBUTFORMLY-RXN KETOBUTFORMLY-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PROPKIN-RXN PROPKIN-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PTAALT-RXN PTAALT-RXN]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* ECOCYC:
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** [http://www.genome.jp/dbget-bin/www_bget?R02255 R02255]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5437 PWY-5437]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: ec number=EC-6.2.1}}
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{{#set: common name=L-threonine degradation I}}
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{{#set: gene associated=Tiso_gene_14183|Tiso_gene_12275}}
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{{#set: reaction found=3}}
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{{#set: in pathway=PWY-6457}}
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{{#set: total reaction=6}}
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{{#set: reconstruction category=orthology}}
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{{#set: completion rate=50.0}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 16:05, 21 March 2018

Pathway PWY-5437

  • taxonomic range:
  • common name:
    • L-threonine degradation I
  • Synonym(s):

Reaction(s) found

3 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links



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