Difference between revisions of "ASPARAGINE--TRNA-LIGASE-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2001 RXN-2001] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/6....")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE--TRNA-LIGASE-RXN ASPARAGINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2001 RXN-2001] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE--TRNA-LIGASE-RXN ASPARAGINE--TRNA-LIGASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** mitochondrial_carrier_(bou_s-adenosylmethionine_carrier)
 +
** ORF
 +
** mitochondrial_substrate_carrier_family_protein
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1 EC-6.2.1]
+
** [http://enzyme.expasy.org/EC/6.1.1.22 EC-6.1.1.22]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-674]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[CINNAMOYL-COA]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[ASN]][c] '''+''' 1 [[ASN-tRNAs]][c] '''=>''' 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 trans-cinnamate[c] '''+''' 1 coenzyme A[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 (E)-cinnamoyl-CoA[c]
+
** 1 ATP[c] '''+''' 1 L-asparagine[c] '''+''' 1 tRNAasn[c] '''=>''' 1 an L-asparaginyl-[tRNAasn][c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_14183]]
+
* Gene: [[Tiso_gene_9304]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_12275]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[athaliana]]
+
* Gene: [[Tiso_gene_9908]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13908]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6065]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_9303]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6457]], trans-cinnamoyl-CoA biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6457 PWY-6457]
+
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[annotation]]
−
** Source: [[orthology-athaliana]]
+
** Source: [[annotation-experimental_annotation]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11180 11180]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02255 R02255]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03648 R03648]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P39772 P39772]
 +
** [http://www.uniprot.org/uniprot/O57980 O57980]
 +
** [http://www.uniprot.org/uniprot/Q9V251 Q9V251]
 +
** [http://www.uniprot.org/uniprot/Q9CEK9 Q9CEK9]
 +
** [http://www.uniprot.org/uniprot/P47359 P47359]
 +
** [http://www.uniprot.org/uniprot/O51128 O51128]
 +
** [http://www.uniprot.org/uniprot/O83618 O83618]
 +
** [http://www.uniprot.org/uniprot/O58008 O58008]
 +
** [http://www.uniprot.org/uniprot/O96198 O96198]
 +
** [http://www.uniprot.org/uniprot/P54262 P54262]
 +
** [http://www.uniprot.org/uniprot/P75521 P75521]
 +
** [http://www.uniprot.org/uniprot/Q48966 Q48966]
 +
** [http://www.uniprot.org/uniprot/P0A8M0 P0A8M0]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-6.2.1}}
+
{{#set: common name=mitochondrial_carrier_(bou_s-adenosylmethionine_carrier)}}
−
{{#set: gene associated=Tiso_gene_14183|Tiso_gene_12275}}
+
{{#set: common name=ORF}}
−
{{#set: in pathway=PWY-6457}}
+
{{#set: common name=mitochondrial_substrate_carrier_family_protein}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: ec number=EC-6.1.1.22}}
−
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
+
{{#set: gene associated=Tiso_gene_9304|Tiso_gene_9908|Tiso_gene_13908|Tiso_gene_6065|Tiso_gene_9303}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: in pathway=TRNA-CHARGING-PWY}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:27, 21 March 2018

Reaction ASPARAGINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • mitochondrial_carrier_(bou_s-adenosylmethionine_carrier)
    • ORF
    • mitochondrial_substrate_carrier_family_protein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 L-asparagine[c] + 1 tRNAasn[c] => 1 an L-asparaginyl-[tRNAasn][c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ASPARAGINE--TRNA-LIGASE-RXN&oldid=41760"