Difference between revisions of "ASPARAGINESYN-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FADSYN-RXN FADSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** fad_synthetase * ec numbe...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSE1PMETAB-PWY GLUCOSE1PMETAB-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?ob...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FADSYN-RXN FADSYN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSE1PMETAB-PWY GLUCOSE1PMETAB-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** fad_synthetase
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** glucose and glucose-1-phosphate degradation
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.7.2 EC-2.7.7.2]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''5''' reactions in the full pathway
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** 1 [[ATP]][c] '''+''' 1 [[FMN]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[FAD]][c]
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* [[GLUCOKIN-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 ATP[c] '''+''' 1 FMN[c] '''+''' 1 H+[c] '''=>''' 1 diphosphate[c] '''+''' 1 FAD[c]
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*** [[Tiso_gene_3107]]
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*** [[Tiso_gene_1303]]
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== Genes associated with this reaction  ==
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** 4 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_1086]]
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[synechocystis]]
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*** [[orthology-synechocystis]]
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* [[Tiso_gene_5393]]
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*** [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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* [[GLUCONOLACT-RXN]]
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***AUTOMATED-NAME-MATCH
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** 3 associated gene(s):
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_1947]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_15098]]
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* [[Tiso_gene_7479]]
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*** [[Tiso_gene_1948]]
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** [[pantograph]]-[[synechocystis]]
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** 1 reconstruction source(s) associated:
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* [[Tiso_gene_5392]]
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[creinhardtii]]
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* [[PHOSPHOGLUCMUT-RXN]]
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== Pathways  ==
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** 2 associated gene(s):
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* [[PWY66-366]], flavin biosynthesis IV (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-366 PWY66-366]
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*** [[Tiso_gene_13477]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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*** [[Tiso_gene_4816]]
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* [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167]
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** 3 reconstruction source(s) associated:
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** '''4''' reactions found over '''10''' reactions in the full pathway
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*** [[annotation-in-silico_annotation]]
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* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
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*** [[manual-primary_network]]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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*** [[annotation-experimental_annotation]]
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* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
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== Reaction(s) not found ==
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSE-1-PHOSPHAT-RXN GLUCOSE-1-PHOSPHAT-RXN]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6373 RXN0-6373]
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17237 17237]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=GLUCOSE1PMETAB-PWY GLUCOSE1PMETAB-PWY]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00161 R00161]
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{{#set: taxonomic range=TAX-2759}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/Q9JVY5 Q9JVY5]
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{{#set: common name=glucose and glucose-1-phosphate degradation}}
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** [http://www.uniprot.org/uniprot/Q9PHS7 Q9PHS7]
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{{#set: reaction found=3}}
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** [http://www.uniprot.org/uniprot/Q59263 Q59263]
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{{#set: total reaction=5}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=60.0}}
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{{#set: common name=fad_synthetase}}
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{{#set: ec number=EC-2.7.7.2}}
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{{#set: gene associated=Tiso_gene_1086|Tiso_gene_5393|Tiso_gene_7479|Tiso_gene_5392}}
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{{#set: in pathway=PWY66-366|PWY-6167|PWY-6168|RIBOSYN2-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:52, 18 March 2018

Pathway GLUCOSE1PMETAB-PWY

  • taxonomic range:
  • common name:
    • glucose and glucose-1-phosphate degradation
  • Synonym(s):

Reaction(s) found

3 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ASPARAGINESYN-PWY&oldid=20282"