Difference between revisions of "ASPARTATE-DEG1-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1884 RXN-1884] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-AMINOAD-PWY LYSINE-AMINOAD-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?ob...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1884 RXN-1884] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-AMINOAD-PWY LYSINE-AMINOAD-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://enzyme.expasy.org/EC/1.1.1.316 EC-1.1.1.316]
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* common name:
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** L-lysine biosynthesis IV
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''9''' reactions in the full pathway
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** 1 [[NAD]][c] '''+''' 1 [[L-Galactopyranose]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CPD-330]][c]
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* [[1.5.1.7-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 NAD+[c] '''+''' 1 L-galactopyranose[c] '''=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 L-galactono-1,4-lactone[c]
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*** [[Tiso_gene_1156]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[2-AMINOADIPATE-AMINOTRANSFERASE-RXN]]
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* [[Tiso_gene_14920]]
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** 0 associated gene:
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** [[pantograph]]-[[esiliculosus]]
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** 1 reconstruction source(s) associated:
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* [[Tiso_gene_14624]]
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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* [[HOMOACONITATE-HYDRATASE-RXN]]
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* [[Tiso_gene_18748]]
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** 1 associated gene(s):
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_12778]]
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* [[Tiso_gene_703]]
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** 1 reconstruction source(s) associated:
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** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_4219]]
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== Reaction(s) not found ==
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** [[pantograph]]-[[athaliana]]
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* [http://metacyc.org/META/NEW-IMAGE?object=HOMOCITRATE-SYNTHASE-RXN HOMOCITRATE-SYNTHASE-RXN]
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16757 RXN-16757]
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* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16758 RXN-16758]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7970 RXN-7970]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-127 RXN3O-127]
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* Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-1983 RXN3O-1983]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-33682}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31562 31562]
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{{#set: taxonomic range=TAX-4751}}
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* LIGAND-RXN:
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{{#set: common name=L-lysine biosynthesis IV}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07675 R07675]
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{{#set: reaction found=3}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=9}}
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{{#set: ec number=EC-1.1.1.316}}
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{{#set: completion rate=33.0}}
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{{#set: gene associated=Tiso_gene_14920|Tiso_gene_14624|Tiso_gene_18748|Tiso_gene_703|Tiso_gene_4219}}
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{{#set: in pathway=PWY-882}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 15:48, 21 March 2018

Pathway LYSINE-AMINOAD-PWY

  • taxonomic range:
  • common name:
    • L-lysine biosynthesis IV
  • Synonym(s):

Reaction(s) found

3 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ASPARTATE-DEG1-PWY&oldid=30306"