Difference between revisions of "CENTFERM-PWY"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5254 PWY-5254] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183980 TAX-...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=CENTFERM-PWY CENTFERM-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-122...")
 
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[[Category:Pathway]]
 
[[Category:Pathway]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5254 PWY-5254] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CENTFERM-PWY CENTFERM-PWY] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183980 TAX-183980]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183988 TAX-183988]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-224756]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183939 TAX-183939]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183925 TAX-183925]
+
 
* common name:
 
* common name:
−
** methanofuran biosynthesis
+
** pyruvate fermentation to butanoate
 
* Synonym(s):
 
* Synonym(s):
 +
** central fermentation pathway
 +
** acetobutylicum fermentation
 +
** pyruvate fermentation to butyrate
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
* '''1''' reaction(s) found
+
'''3''' reactions found over '''7''' reactions in the full pathway
−
** [[TYROSINE-DECARBOXYLASE-RXN]]
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_16181]]
 +
*** [[Tiso_gene_15327]]
 +
*** [[Tiso_gene_17451]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-11662]]
 +
** 7 associated gene(s):
 +
*** [[Tiso_gene_16703]]
 +
*** [[Tiso_gene_14027]]
 +
*** [[Tiso_gene_14262]]
 +
*** [[Tiso_gene_14026]]
 +
*** [[Tiso_gene_18838]]
 +
*** [[Tiso_gene_18839]]
 +
*** [[Tiso_gene_5857]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-11667]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_5857]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* '''7''' reaction(s) not found
+
* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRATE-KINASE-RXN BUTYRATE-KINASE-RXN]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-8119 RXN-8119]
+
* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRYL-COA-DEHYDROGENASE-RXN BUTYRYL-COA-DEHYDROGENASE-RXN]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-8123 RXN-8123]
+
* [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHATE-BUTYRYLTRANSFERASE-RXN PHOSPHATE-BUTYRYLTRANSFERASE-RXN]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-15945 RXN-15945]
+
* [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-15944 RXN-15944]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-15947 RXN-15947]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-15946 RXN-15946]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-15949 RXN-15949]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-183980}}
+
{{#set: taxonomic range=TAX-1224}}
−
{{#set: taxonomic range=TAX-183988}}
+
{{#set: taxonomic range=TAX-1239}}
−
{{#set: taxonomic range=TAX-224756}}
+
{{#set: common name=pyruvate fermentation to butanoate}}
−
{{#set: taxonomic range=TAX-183939}}
+
{{#set: common name=central fermentation pathway|acetobutylicum fermentation|pyruvate fermentation to butyrate}}
−
{{#set: taxonomic range=TAX-183925}}
+
{{#set: reaction found=3}}
−
{{#set: common name=methanofuran biosynthesis}}
+
{{#set: total reaction=7}}
−
{{#set: reaction found=1}}
+
{{#set: completion rate=43.0}}
−
{{#set: reaction not found=7}}
+

Latest revision as of 20:33, 21 March 2018

Pathway CENTFERM-PWY

  • taxonomic range:
  • common name:
    • pyruvate fermentation to butanoate
  • Synonym(s):
    • central fermentation pathway
    • acetobutylicum fermentation
    • pyruvate fermentation to butyrate

Reaction(s) found

3 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CENTFERM-PWY&oldid=42359"