Difference between revisions of "CODH-PWY"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-114 CPD1F-114] == * smiles: ** CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC=C(CCC=C(C)C)C)...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
 
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[[Category:Metabolite]]
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[[Category:Pathway]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-114 CPD1F-114] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY] ==
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* smiles:
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* taxonomic range:
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** CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC=C(CCC=C(C)C)C)C)C)C)C)C)C
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** all-trans-lycopene
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** reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)
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* inchi key:
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** InChIKey=OAIJSZIZWZSQBC-GYZMGTAESA-N
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* molecular weight:
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** 536.882   
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* Synonym(s):
 
* Synonym(s):
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** ψ,ψ-carotene
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** Wood pathway
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** acetate synthesis
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** acetyl-CoA pathway
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** carbon monoxide dehydrogenase pathway
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** carbon fixation
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** CO2 fixation
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** Ljungdahl-Wood pathway
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** Wood-Ljungdahl pathway
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** reductive acetyl CoA pathway
  
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== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
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* [[RXN1F-147]]
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'''5''' reactions found over '''9''' reactions in the full pathway
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* [[RXN1F-150]]
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* [[1.5.1.20-RXN]]
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== Reaction(s) known to produce the compound ==
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** 2 associated gene(s):
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* [[R96]]
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*** [[Tiso_gene_14582]]
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* [[RXN-8042]]
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*** [[Tiso_gene_16954]]
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== Reaction(s) of unknown directionality ==
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** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[FORMATETHFLIG-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_432]]
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*** [[Tiso_gene_7582]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[METHENYLTHFCYCLOHYDRO-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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* [[METHYLENETHFDEHYDROG-NADP-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_6004]]
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*** [[Tiso_gene_432]]
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** 3 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-5061]]
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** 1 associated gene(s):
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*** [[Tiso_gene_4806]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=1.2.7.4-RXN 1.2.7.4-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=ACETYLSYNCLTH-RXN ACETYLSYNCLTH-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=FORMATE-DEHYDROGENASE-NADP+-RXN FORMATE-DEHYDROGENASE-NADP+-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=METHCOCLTH-RXN METHCOCLTH-RXN]
 
== External links  ==
 
== External links  ==
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* LIPID_MAPS : LMPR01070257
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{{#set: taxonomic range=TAX-2157}}
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* PUBCHEM:
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{{#set: taxonomic range=TAX-2}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=446925 446925]
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{{#set: common name=reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)}}
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* HMDB : HMDB03000
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{{#set: common name=Wood pathway|acetate synthesis|acetyl-CoA pathway|carbon monoxide dehydrogenase pathway|carbon fixation|CO2 fixation|Ljungdahl-Wood pathway|Wood-Ljungdahl pathway|reductive acetyl CoA pathway}}
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* LIGAND-CPD:
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{{#set: reaction found=5}}
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** [http://www.genome.jp/dbget-bin/www_bget?C05432 C05432]
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{{#set: total reaction=9}}
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* CHEMSPIDER:
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{{#set: completion rate=56.0}}
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** [http://www.chemspider.com/Chemical-Structure.394156.html 394156]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15948 15948]
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* METABOLIGHTS : MTBLC15948
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{{#set: smiles=CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC=C(CCC=C(C)C)C)C)C)C)C)C)C}}
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−
{{#set: common name=all-trans-lycopene}}
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{{#set: inchi key=InChIKey=OAIJSZIZWZSQBC-GYZMGTAESA-N}}
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{{#set: molecular weight=536.882    }}
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{{#set: common name=ψ,ψ-carotene}}
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{{#set: consumed by=RXN1F-147|RXN1F-150}}
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{{#set: produced by=R96|RXN-8042}}
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Latest revision as of 20:41, 21 March 2018

Pathway CODH-PWY

  • taxonomic range:
  • common name:
    • reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)
  • Synonym(s):
    • Wood pathway
    • acetate synthesis
    • acetyl-CoA pathway
    • carbon monoxide dehydrogenase pathway
    • carbon fixation
    • CO2 fixation
    • Ljungdahl-Wood pathway
    • Wood-Ljungdahl pathway
    • reductive acetyl CoA pathway

Reaction(s) found

5 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CODH-PWY&oldid=43211"