Difference between revisions of "CPD-18390"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENODEAMIN-RXN ADENODEAMIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** aldo-ket...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4302 PWY-4302] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-3...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENODEAMIN-RXN ADENODEAMIN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4302 PWY-4302] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** ORF
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** aerobic respiration III (alternative oxidase pathway)
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** aldo-keto_reductase_family_4_member_c9_isoform_x2
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* ec number:
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** [http://enzyme.expasy.org/EC/3.5.4.4 EC-3.5.4.4]
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* Synonym(s):
 
* Synonym(s):
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** alternative oxidase pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''3''' reactions in the full pathway
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** 1 [[ADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INOSINE]][c] '''+''' 1 [[AMMONIUM]][c]
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* [[NADH-DEHYDROG-A-RXN]]
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* With common name(s):
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** 18 associated gene(s):
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** 1 adenosine[c] '''+''' 1 H+[c] '''+''' 1 H2O[c] '''=>''' 1 inosine[c] '''+''' 1 ammonium[c]
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*** [[Tiso_gene_10326]]
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*** [[Tiso_gene_18831]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_4894]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_9874]]
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* [[Tiso_gene_18322]]
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*** [[Tiso_gene_18172]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_18339]]
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***EC-NUMBER
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*** [[Tiso_gene_19691]]
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* [[Tiso_gene_19373]]
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*** [[Tiso_gene_2949]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_4836]]
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***EC-NUMBER
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*** [[Tiso_gene_17199]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_5171]]
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== Pathways  ==
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*** [[Tiso_gene_18707]]
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* [[PWY-6609]], adenine and adenosine salvage III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6609 PWY-6609]
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*** [[Tiso_gene_359]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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*** [[Tiso_gene_3113]]
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* [[PWY0-1296]], purine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1296 PWY0-1296]
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*** [[Tiso_gene_13075]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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*** [[Tiso_gene_355]]
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* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
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*** [[Tiso_gene_358]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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*** [[Tiso_gene_15276]]
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* [[PWY-6611]], adenine and adenosine salvage V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6611 PWY-6611]
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** 4 reconstruction source(s) associated:
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** '''1''' reactions found over '''3''' reactions in the full pathway
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*** [[annotation-experimental_annotation]]
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== Reconstruction information  ==
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*** [[manual-primary_network]]
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* [[orthology]]:
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]:
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*** [[orthology-esiliculosus]]
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*** [[esiliculosus]]
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* [[RXN-6883]]
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* [[annotation]]:
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** 4 associated gene(s):
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** [[pathwaytools]]:
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*** [[Tiso_gene_7486]]
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*** [[in-silico_annotation]]
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*** [[Tiso_gene_17130]]
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*** [[Tiso_gene_7953]]
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*** [[Tiso_gene_8278]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ARACYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24408 24408]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-4302 PWY-4302]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33682}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01560 R01560]
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{{#set: taxonomic range=TAX-4751}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.uniprot.org/uniprot/P22333 P22333]
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{{#set: common name=aerobic respiration III (alternative oxidase pathway)}}
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** [http://www.uniprot.org/uniprot/P00813 P00813]
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{{#set: common name=alternative oxidase pathway}}
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** [http://www.uniprot.org/uniprot/P03958 P03958]
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{{#set: reaction found=3}}
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** [http://www.uniprot.org/uniprot/Q9CIR9 Q9CIR9]
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{{#set: total reaction=3}}
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** [http://www.uniprot.org/uniprot/P55266 P55266]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/P53984 P53984]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: common name=aldo-keto_reductase_family_4_member_c9_isoform_x2}}
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{{#set: ec number=EC-3.5.4.4}}
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{{#set: gene associated=Tiso_gene_18322|Tiso_gene_19373}}
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{{#set: in pathway=PWY-6609|PWY0-1296|SALVADEHYPOX-PWY|PWY-6611}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 19:27, 18 March 2018

Pathway PWY-4302

  • taxonomic range:
  • common name:
    • aerobic respiration III (alternative oxidase pathway)
  • Synonym(s):
    • alternative oxidase pathway

Reaction(s) found

3 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-18390&oldid=24538"