Difference between revisions of "Cis-cis-D9-21-C40-2-ACPs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12460 RXN-12460] == * direction: ** LEFT-TO-RIGHT * common name: ** L-asparaginyl-tRNAasn hydro...")
 
(Created page with "Category:Gene == Gene Tiso_gene_6799 == * left end position: ** 8738 * transcription direction: ** NEGATIVE * right end position: ** 11763 * centisome position: ** 73.9443...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12460 RXN-12460] ==
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== Gene Tiso_gene_6799 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 8738
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* common name:
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* transcription direction:
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** L-asparaginyl-tRNAasn hydrolase
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** NEGATIVE
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** peptidyl-trna_hydrolase
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* right end position:
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* ec number:
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** 11763
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** [http://enzyme.expasy.org/EC/3.1.1.29 EC-3.1.1.29]
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* centisome position:
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** 73.94432   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[GDPPYPHOSKIN-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[Charged-ASN-tRNAs]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ASN-tRNAs]][c] '''+''' 1 [[ASN]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 H2O[c] '''+''' 1 an L-asparaginyl-[tRNAasn][c] '''=>''' 1 H+[c] '''+''' 1 tRNAasn[c] '''+''' 1 L-asparagine[c]
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* [[GTPPYPHOSKIN-RXN]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* [[PPGPPSYN-RXN]]
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* [[Tiso_gene_14300]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[RXN0-6427]]
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** [[pantograph]]-[[esiliculosus]]
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** in-silico_annotation
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* [[Tiso_gene_13800]]
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***ec-number
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** EXPERIMENTAL_ANNOTATION
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== Pathways associated ==
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***AUTOMATED-NAME-MATCH
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* [[PPGPPMET-PWY]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_7443]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY490-4]], L-asparagine biosynthesis III (tRNA-dependent): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-4 PWY490-4]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=8738}}
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{{#set: common name=L-asparaginyl-tRNAasn hydrolase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=peptidyl-trna_hydrolase}}
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{{#set: right end position=11763}}
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{{#set: ec number=EC-3.1.1.29}}
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{{#set: centisome position=73.94432    }}
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{{#set: gene associated=Tiso_gene_14300|Tiso_gene_13800|Tiso_gene_7443}}
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{{#set: reaction associated=GDPPYPHOSKIN-RXN|GTPPYPHOSKIN-RXN|PPGPPSYN-RXN|RXN0-6427}}
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{{#set: in pathway=PWY490-4}}
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{{#set: pathway associated=PPGPPMET-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:05, 10 January 2018

Gene Tiso_gene_6799

  • left end position:
    • 8738
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 11763
  • centisome position:
    • 73.94432
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Cis-cis-D9-21-C40-2-ACPs&oldid=16075"