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| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSINE--TRNA-LIGASE-RXN LYSINE--TRNA-LIGASE-RXN] == | + | == Gene Tiso_gene_18056 == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| − | * common name:
| + | |
| − | ** lysine--trna_ligase
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/6.1.1.6 EC-6.1.1.6]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers: | + | * [[1.14.19.1-RXN]] |
| − | ** 1 [[LYS]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[LYS-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-LYS-tRNAs]][c]
| + | ** [[pantograph]]-[[esiliculosus]] |
| − | * With common name(s): | + | * [[RXN-11680]] |
| − | ** 1 L-lysine[c] '''+''' 1 ATP[c] '''+''' 1 a tRNAlys[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-lysyl-[tRNAlys][c] | + | |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_16635]] | + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| | ** [[pantograph]]-[[esiliculosus]] | | ** [[pantograph]]-[[esiliculosus]] |
| − | * [[Tiso_gene_6705]] | + | * [[RXN-12776]] |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| | ** [[pantograph]]-[[esiliculosus]] | | ** [[pantograph]]-[[esiliculosus]] |
| − | == Pathways == | + | == Pathways associated == |
| − | * [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] | + | * [[PWY-5353]] |
| − | ** '''21''' reactions found over '''21''' reactions in the full pathway
| + | * [[PWY-6603]] |
| − | == Reconstruction information ==
| + | * [[PWY-5996]] |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[esiliculosus]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[experimental_annotation]]
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | * LIGAND-RXN:
| + | {{#set: reaction associated=1.14.19.1-RXN|RXN-11680|RXN-12776}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R03658 R03658]
| + | {{#set: pathway associated=PWY-5353|PWY-6603|PWY-5996}} |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/P41258 P41258]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P46861 P46861]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P47382 P47382]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O57963 O57963]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O51603 O51603]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JTT7 Q9JTT7]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O83650 O83650]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9X231 Q9X231]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P43825 P43825]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZDF8 Q9ZDF8]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O84786 O84786]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9Z6X5 Q9Z6X5]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9CII7 Q9CII7]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P56126 P56126]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZMP8 Q9ZMP8]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O67258 O67258]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O84002 O84002]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9RHV9 Q9RHV9]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P32048 P32048]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P37879 P37879]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q48986 Q48986]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P0A8N7 P0A8N7]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P37477 P37477]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P75500 P75500]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P95970 P95970]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P73443 P73443]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P15180 P15180]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P0A8N3 P0A8N3]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P0A8N5 P0A8N5]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q43776 Q43776]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O74059 O74059]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O30522 O30522]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=lysine--trna_ligase}}
| + | |
| − | {{#set: ec number=EC-6.1.1.6}}
| + | |
| − | {{#set: gene associated=Tiso_gene_16635|Tiso_gene_6705}}
| + | |
| − | {{#set: in pathway=TRNA-CHARGING-PWY}} | + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=esiliculosus}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
| + | |
