Difference between revisions of "DIHYDRODIPICSYN-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9651 RXN-9651] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** 3-oxoa...")
 
(Created page with "Category:Gene == Gene Tiso_gene_1398 == * left end position: ** 16012 * transcription direction: ** POSITIVE * right end position: ** 21490 * centisome position: ** 67.046...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9651 RXN-9651] ==
+
== Gene Tiso_gene_1398 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 16012
−
* common name:
+
* transcription direction:
−
** polyketide_synthase
+
** POSITIVE
−
** 3-oxoacyl-synthase
+
* right end position:
−
* ec number:
+
** 21490
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
+
** 67.04631   
−
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[3.2.1.23-RXN]]
−
** 1 [[PROTON]][c] '''+''' 1 [[Octanoyl-ACPs]][c] '''+''' 1 [[MALONYL-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[3-oxo-decanoyl-ACPs]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***ec-number
−
** 1 H+[c] '''+''' 1 an octanoyl-[acp][c] '''+''' 1 malonyl-CoA[c] '''=>''' 1 coenzyme A[c] '''+''' 1 CO2[c] '''+''' 1 a 3-oxo-decanoyl-[acp][c]
+
** [[pantograph]]-[[esiliculosus]]
−
 
+
* [[BETAGALACTOSID-RXN]]
−
== Genes associated with this reaction  ==
+
** in-silico_annotation
−
Genes have been associated with this reaction based on different elements listed below.
+
***ec-number
−
* [[Tiso_gene_135]]
+
** [[pantograph]]-[[esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* [[KETOLACTOSE-RXN]]
−
***EC-NUMBER
+
** in-silico_annotation
−
* [[Tiso_gene_15991]]
+
***ec-number
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-12398]]
 +
** in-silico_annotation
 +
***ec-number
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_136]]
+
* [[RXN-12399]]
−
** IN-SILICO_ANNOTATION
+
** in-silico_annotation
−
***EC-NUMBER
+
***ec-number
−
* [[Tiso_gene_13394]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_14485]]
+
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_19302]]
+
* [[RXN-12400]]
 +
** in-silico_annotation
 +
***ec-number
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_10876]]
+
== Pathways associated ==
−
** IN-SILICO_ANNOTATION
+
* [[PWY-6807]]
−
***EC-NUMBER
+
* [[BGALACT-PWY]]
−
* [[Tiso_gene_500]]
+
* [[LACTOSEUTIL-PWY]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_5939]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways ==
+
−
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
+
−
** '''31''' reactions found over '''31''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=16012}}
−
{{#set: common name=polyketide_synthase}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=3-oxoacyl-synthase}}
+
{{#set: right end position=21490}}
−
{{#set: ec number=EC-2.3.1.86}}
+
{{#set: centisome position=67.04631    }}
−
{{#set: ec number=EC-2.3.1.85}}
+
{{#set: reaction associated=3.2.1.23-RXN|BETAGALACTOSID-RXN|KETOLACTOSE-RXN|RXN-12398|RXN-12399|RXN-12400}}
−
{{#set: ec number=EC-2.3.1.41}}
+
{{#set: pathway associated=PWY-6807|BGALACT-PWY|LACTOSEUTIL-PWY}}
−
{{#set: gene associated=Tiso_gene_135|Tiso_gene_15991|Tiso_gene_136|Tiso_gene_13394|Tiso_gene_14485|Tiso_gene_19302|Tiso_gene_10876|Tiso_gene_500|Tiso_gene_5939}}
+
−
{{#set: in pathway=PWY-5994}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 16:40, 10 January 2018

Gene Tiso_gene_1398

  • left end position:
    • 16012
  • transcription direction:
    • POSITIVE
  • right end position:
    • 21490
  • centisome position:
    • 67.04631
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=DIHYDRODIPICSYN-RXN&oldid=10003"