Difference between revisions of "DIHYDROXYMETVALDEHYDRAT-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-BETAINE-ANA-PWY CHOLINE-BETAINE-ANA-PWY] == * taxonomic range: ** [http://metacyc.org/META/NE...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROXYMETVALDEHYDRAT-RXN DIHYDROXYMETVALDEHYDRAT-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-BETAINE-ANA-PWY CHOLINE-BETAINE-ANA-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROXYMETVALDEHYDRAT-RXN DIHYDROXYMETVALDEHYDRAT-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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* common name:
 
* common name:
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** choline degradation I
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** 2,3-Dihydroxy-3-methylvalerate dehydratase
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.1.9 EC-4.2.1.9]
 
* Synonym(s):
 
* Synonym(s):
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** choline betaine anabolism
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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  '''2''' reactions found over '''2''' reactions in the full pathway
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* With identifiers:
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* [[BADH-RXN]]
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** 1 [[1-KETO-2-METHYLVALERATE]][c] '''=>''' 1 [[2-KETO-3-METHYL-VALERATE]][c] '''+''' 1 [[WATER]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_3513]]
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** 1 (R)-2,3-dihydroxy-3-methylpentanoate[c] '''=>''' 1 (S)-3-methyl-2-oxopentanoate[c] '''+''' 1 H2O[c]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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== Genes associated with this reaction  ==
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* [[CHD-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 associated gene(s):
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* Gene: [[Tiso_gene_1563]]
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*** [[Tiso_gene_16765]]
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** Source: [[orthology-athaliana]]
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-synechocystis]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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** Source: [[orthology-creinhardtii]]
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== Pathways ==
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* [[PWY-5103]], L-isoleucine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101]
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** '''5''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5104]], L-isoleucine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5104 PWY-5104]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33208}}
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* RHEA:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27694 27694]
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{{#set: taxonomic range=TAX-1224}}
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* LIGAND-RXN:
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{{#set: common name=choline degradation I}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05070 R05070]
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{{#set: common name=choline betaine anabolism}}
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* UNIPROT:
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{{#set: reaction found=2}}
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** [http://www.uniprot.org/uniprot/P55186 P55186]
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{{#set: total reaction=2}}
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** [http://www.uniprot.org/uniprot/Q9JUE0 Q9JUE0]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/P05791 P05791]
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** [http://www.uniprot.org/uniprot/Q9UZ03 Q9UZ03]
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** [http://www.uniprot.org/uniprot/P44851 P44851]
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** [http://www.uniprot.org/uniprot/Q02139 Q02139]
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** [http://www.uniprot.org/uniprot/Q9PJ98 Q9PJ98]
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** [http://www.uniprot.org/uniprot/P39522 P39522]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=2,3-Dihydroxy-3-methylvalerate dehydratase}}
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{{#set: ec number=EC-4.2.1.9}}
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{{#set: gene associated=Tiso_gene_1563}}
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{{#set: in pathway=PWY-5103|ILEUSYN-PWY|PWY-5101|PWY-5104}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:47, 21 March 2018

Reaction DIHYDROXYMETVALDEHYDRAT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2,3-Dihydroxy-3-methylvalerate dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5103, L-isoleucine biosynthesis III: PWY-5103
    • 4 reactions found over 7 reactions in the full pathway
  • ILEUSYN-PWY, L-isoleucine biosynthesis I (from threonine): ILEUSYN-PWY
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-5101, L-isoleucine biosynthesis II: PWY-5101
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-5104, L-isoleucine biosynthesis IV: PWY-5104
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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