Difference between revisions of "FASYN-ELONG-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-MUT-RXN METHYLMALONYL-COA-MUT-RXN] == * direction: ** REVERSIBLE * common name: *...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=FASYN-ELONG-PWY FASYN-ELONG-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=T...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-MUT-RXN METHYLMALONYL-COA-MUT-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=FASYN-ELONG-PWY FASYN-ELONG-PWY] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** methylmalonyl-_mitochondrial
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** fatty acid elongation -- saturated
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* ec number:
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** [http://enzyme.expasy.org/EC/5.4.99.2 EC-5.4.99.2]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''5''' reactions in the full pathway
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** 1 [[METHYL-MALONYL-COA]][c] '''<=>''' 1 [[SUC-COA]][c]
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* [[3-HYDROXYDECANOYL-ACP-DEHYDR-RXN]]
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* With common name(s):
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** 6 associated gene(s):
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** 1 (R)-methylmalonyl-CoA[c] '''<=>''' 1 succinyl-CoA[c]
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*** [[Tiso_gene_13394]]
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*** [[Tiso_gene_135]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_6884]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_500]]
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* [[Tiso_gene_9771]]
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*** [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_10876]]
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***EC-NUMBER
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** 2 reconstruction source(s) associated:
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** EXPERIMENTAL_ANNOTATION
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*** [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** [[annotation-experimental_annotation]]
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== Pathways  ==
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* [[3-OXOACYL-ACP-REDUCT-RXN]]
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* [[PWY0-43]], conversion of succinate to propanoate: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-43 PWY0-43]
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** 7 associated gene(s):
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** '''1''' reactions found over '''3''' reactions in the full pathway
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*** [[Tiso_gene_9885]]
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* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384]
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*** [[Tiso_gene_13394]]
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** '''7''' reactions found over '''12''' reactions in the full pathway
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*** [[Tiso_gene_13083]]
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* [[PWY-5743]], 3-hydroxypropanoate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743]
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*** [[Tiso_gene_135]]
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** '''4''' reactions found over '''11''' reactions in the full pathway
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*** [[Tiso_gene_10876]]
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* [[PWY-6728]], methylaspartate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728]
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*** [[Tiso_gene_500]]
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** '''11''' reactions found over '''18''' reactions in the full pathway
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*** [[Tiso_gene_136]]
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* [[PROPIONMET-PWY]], propanoyl CoA degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PROPIONMET-PWY PROPIONMET-PWY]
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** 3 reconstruction source(s) associated:
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** '''2''' reactions found over '''3''' reactions in the full pathway
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*** [[annotation-experimental_annotation]]
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* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
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*** [[annotation-in-silico_annotation]]
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** '''8''' reactions found over '''16''' reactions in the full pathway
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*** [[orthology-esiliculosus]]
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* [[P108-PWY]], pyruvate fermentation to propanoate I: [http://metacyc.org/META/NEW-IMAGE?object=P108-PWY P108-PWY]
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* [[3-OXOACYL-ACP-SYNTH-RXN]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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** 9 associated gene(s):
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== Reconstruction information  ==
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*** [[Tiso_gene_135]]
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* [[annotation]]:
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*** [[Tiso_gene_19302]]
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** [[pathwaytools]]:
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*** [[Tiso_gene_5939]]
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*** [[experimental_annotation]]
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*** [[Tiso_gene_500]]
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*** [[in-silico_annotation]]
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*** [[Tiso_gene_136]]
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*** [[Tiso_gene_13394]]
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*** [[Tiso_gene_14485]]
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*** [[Tiso_gene_10876]]
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*** [[Tiso_gene_15991]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[ENOYL-ACP-REDUCT-NADH-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_10778]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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* [[ENOYL-ACP-REDUCT-NADPH-RXN]]
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** 5 associated gene(s):
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*** [[Tiso_gene_500]]
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*** [[Tiso_gene_136]]
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*** [[Tiso_gene_135]]
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*** [[Tiso_gene_13394]]
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*** [[Tiso_gene_10876]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22888 22888]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=FASYN-ELONG-PWY FASYN-ELONG-PWY]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00833 R00833]
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{{#set: taxonomic range=TAX-2}}
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* UNIPROT:
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{{#set: common name=fatty acid elongation -- saturated}}
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** [http://www.uniprot.org/uniprot/Q05064 Q05064]
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{{#set: reaction found=5}}
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** [http://www.uniprot.org/uniprot/P22033 P22033]
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{{#set: total reaction=5}}
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** [http://www.uniprot.org/uniprot/Q05065 Q05065]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/O74009 O74009]
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** [http://www.uniprot.org/uniprot/Q9YBB0 Q9YBB0]
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** [http://www.uniprot.org/uniprot/Q9V0E8 Q9V0E8]
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** [http://www.uniprot.org/uniprot/Q9RV41 Q9RV41]
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** [http://www.uniprot.org/uniprot/O28068 O28068]
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** [http://www.uniprot.org/uniprot/Q59676 Q59676]
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** [http://www.uniprot.org/uniprot/Q59677 Q59677]
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** [http://www.uniprot.org/uniprot/P11652 P11652]
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** [http://www.uniprot.org/uniprot/P11653 P11653]
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** [http://www.uniprot.org/uniprot/P16332 P16332]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=methylmalonyl-_mitochondrial}}
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{{#set: ec number=EC-5.4.99.2}}
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{{#set: gene associated=Tiso_gene_9771}}
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{{#set: in pathway=PWY0-43|PWY-7384|PWY-5743|PWY-6728|PROPIONMET-PWY|PWY-5789|P108-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:39, 21 March 2018

Pathway FASYN-ELONG-PWY

  • taxonomic range:
  • common name:
    • fatty acid elongation -- saturated
  • Synonym(s):

Reaction(s) found

5 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=FASYN-ELONG-PWY&oldid=42989"